Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SNORA38-201ENST00000363946 132 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-851P-201ENST00000384565 107 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR487A-201ENST00000385009 80 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR190B-201ENST00000401119 79 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC105758.1-201ENST00000506038 399 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 EIF4BP1-201ENST00000554881 351 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 SUB1P3-201ENST00000564581 315 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC090517.1-201ENST00000569307 266 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR5701-3-201ENST00000578890 82 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR5701-1-201ENST00000585138 82 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AL080274.1-201ENST00000605565 220 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC090115.4-201ENST00000609970 188 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 MIR5701-2-201ENST00000615634 82 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
NECTIN3Q9NQS3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.197-201ENST00000364004 102 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 SNORA18.3-201ENST00000384122 132 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 MIR592-201ENST00000384959 97 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 MIR559-201ENST00000385188 96 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 MIR561-201ENST00000385216 97 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 MIR1294-201ENST00000408503 142 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 RPS26P42-201ENST00000413485 326 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 MTCO2P12-201ENST00000427426 682 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-965P-201ENST00000516721 96 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 AL033523.1-201ENST00000605153 153 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 AC022140.2-201ENST00000623500 188 ntBASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
NECTIN3Q9NQS3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 RNU1-23P-201ENST00000363361 144 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-546P-201ENST00000383991 107 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-17P-201ENST00000384245 107 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-18P-201ENST00000384527 107 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 MIR549A-201ENST00000385268 96 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 MIR320B2-201ENST00000408479 138 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 RNU2-32P-201ENST00000411193 191 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 COTL1P1-201ENST00000422309 375 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 CBX3P6-201ENST00000430257 527 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AL445305.1-201ENST00000432577 575 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AC112220.1-201ENST00000434628 355 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AC107083.1-201ENST00000439643 279 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AC099799.1-201ENST00000439809 192 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AL135938.1-201ENST00000443141 297 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AC103975.1-201ENST00000482506 483 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 MIR449C-201ENST00000516047 92 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 RNU6-976P-201ENST00000516086 111 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 SNORA48.11-201ENST00000517015 89 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 SNORD116.3-201ENST00000517176 78 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 LARP7P3-201ENST00000579888 337 ntBASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NECTIN3Q9NQS3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 ZNF204P-201ENST00000416749 2397 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 RNU1-35P-201ENST00000362782 153 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.445-201ENST00000384168 102 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 U8.10-201ENST00000384260 133 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 MIR95-201ENST00000385072 81 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.68□□□□□ -1.98
NECTIN3Q9NQS3 AC027124.2-201ENST00000428249 105 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms