Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AP000654.2-201ENST00000605633 586 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 AC009318.2-201ENST00000610917 651 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 AL159153.1-201ENST00000619688 317 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 U2.10-201ENST00000620268 191 ntBASIC2.58□□□□□ -2
DDX4Q9NQI0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
DDX4Q9NQI0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.58□□□□□ -2
DDX4Q9NQI0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX4Q9NQI0 RNU4-79P-201ENST00000362764 141 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RNU6-529P-201ENST00000363383 104 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RNU6-1188P-201ENST00000363795 107 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 Y_RNA.259-201ENST00000364619 101 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RNU6-142P-201ENST00000384019 107 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 Y_RNA.509-201ENST00000384506 99 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 Y_RNA.594-201ENST00000410373 140 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RNU6-174P-201ENST00000410406 106 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RNU4-14P-201ENST00000410858 122 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 Z82205.1-201ENST00000428456 297 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.57□□□□□ -2
DDX4Q9NQI0 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 Y_RNA.632-201ENST00000459189 102 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 AC073901.1-201ENST00000462471 408 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RPL30P12-201ENST00000474666 353 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 AC023141.11-201ENST00000508864 202 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.57□□□□□ -2
DDX4Q9NQI0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.57□□□□□ -2
DDX4Q9NQI0 AC011494.1-201ENST00000596454 237 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 MIR219B-201ENST00000637023 88 ntBASIC2.57□□□□□ -2
DDX4Q9NQI0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.57□□□□□ -2
DDX4Q9NQI0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
DDX4Q9NQI0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
DDX4Q9NQI0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.56□□□□□ -2
DDX4Q9NQI0 Y_RNA.11-201ENST00000362375 109 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 RNU6-212P-201ENST00000362642 104 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 Y_RNA.67-201ENST00000362870 100 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 Y_RNA.431-201ENST00000384086 102 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 SNORA75.4-201ENST00000391278 119 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 USMG5P1-201ENST00000425964 177 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.56□□□□□ -2
DDX4Q9NQI0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.56□□□□□ -2
DDX4Q9NQI0 AC244670.1-201ENST00000436879 112 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AL031659.1-201ENST00000447075 539 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 Y_RNA.653-201ENST00000459091 95 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 SNORD19B-201ENST00000459623 84 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC104564.1-201ENST00000493028 407 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC022447.4-201ENST00000504053 364 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 Y_RNA.670-201ENST00000516255 105 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 APOOP3-201ENST00000536787 586 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 HSPE1P4-201ENST00000550617 308 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC015712.3-201ENST00000559380 164 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.56□□□□□ -2
DDX4Q9NQI0 MIR4273-201ENST00000582824 84 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 MIR3136-201ENST00000583498 78 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
DDX4Q9NQI0 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC009229.3-201ENST00000608056 282 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.56□□□□□ -2
DDX4Q9NQI0 AL669831.3-213ENST00000636676 183 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 MTND4P29-201ENST00000503122 1372 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
DDX4Q9NQI0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
DDX4Q9NQI0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX4Q9NQI0 Y_RNA.123-201ENST00000363338 102 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 MIR186-201ENST00000384988 86 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 RNY4P36-201ENST00000391116 96 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 AL078595.1-201ENST00000404458 226 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.55□□□□□ -2
DDX4Q9NQI0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
DDX4Q9NQI0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX4Q9NQI0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.55□□□□□ -2
DDX4Q9NQI0 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 MTND5P9-201ENST00000503854 1755 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms