Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Z98742.2-201ENST00000431564 187 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 MTCO3P29-201ENST00000432119 779 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 RNU2-53P-201ENST00000516257 147 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.27□□□□□ -1.89
VTA1Q9NP79 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.27□□□□□ -1.89
VTA1Q9NP79 MIR4680-201ENST00000580906 66 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 AC116312.1-201ENST00000606841 314 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VTA1Q9NP79 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VTA1Q9NP79 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
VTA1Q9NP79 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTA1Q9NP79 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTA1Q9NP79 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTA1Q9NP79 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 RNU6-541P-201ENST00000384709 110 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 RNU1-139P-201ENST00000391307 165 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 MIR320B2-201ENST00000408479 138 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 U6atac.2-201ENST00000408644 118 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 RNU6-1140P-201ENST00000410517 106 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
VTA1Q9NP79 AC063976.3-201ENST00000426849 329 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 Z82188.1-201ENST00000436709 154 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.26□□□□□ -1.89
VTA1Q9NP79 AL353752.1-201ENST00000454946 260 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 MTND5P22-201ENST00000458380 195 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 AC007215.1-201ENST00000464893 276 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 RNU6-764P-201ENST00000516396 105 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 SNORA64.4-201ENST00000516632 81 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 Y_RNA.720-201ENST00000517166 92 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.26□□□□□ -1.89
VTA1Q9NP79 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.26□□□□□ -1.89
VTA1Q9NP79 AC006600.1-201ENST00000572529 153 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 SNORD58B-201ENST00000607313 66 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 AL162373.1-201ENST00000620433 407 ntBASIC3.26□□□□□ -1.89
VTA1Q9NP79 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTA1Q9NP79 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTA1Q9NP79 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VTA1Q9NP79 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
VTA1Q9NP79 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VTA1Q9NP79 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VTA1Q9NP79 AL136360.1-201ENST00000503377 1900 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VTA1Q9NP79 Y_RNA.106-201ENST00000363189 100 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 Y_RNA.152-201ENST00000363578 100 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 Y_RNA.319-201ENST00000365138 92 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 Y_RNA.455-201ENST00000384230 98 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.25□□□□□ -1.89
VTA1Q9NP79 AL590556.1-201ENST00000423231 483 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 USP9YP16-201ENST00000430287 407 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 USP9YP23-201ENST00000455085 407 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.25□□□□□ -1.89
VTA1Q9NP79 RNU6-1114P-201ENST00000516022 107 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 SCARNA17.1-201ENST00000516211 143 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 SCARNA17.2-201ENST00000516334 143 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.25□□□□□ -1.89
VTA1Q9NP79 RPS29P30-201ENST00000600975 111 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 AL133393.1-201ENST00000603277 287 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 AL078605.1-201ENST00000603529 500 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 RPL17P51-201ENST00000605218 238 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 SCARNA17.4-201ENST00000614296 143 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
VTA1Q9NP79 Y_RNA.40-201ENST00000362645 93 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 RNU6-280P-201ENST00000364145 104 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 RNU4-50P-201ENST00000364361 141 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 U8.10-201ENST00000384260 133 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 MIR29B2-201ENST00000385055 81 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC108938.1-201ENST00000451204 136 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC080013.2-201ENST00000460866 323 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 MTND4LP22-201ENST00000508209 276 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 SNORA31.16-201ENST00000516773 139 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC079600.2-201ENST00000550076 130 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 MIR5188-201ENST00000583467 113 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 MIR3616-201ENST00000584070 92 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC008737.2-201ENST00000599446 118 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AC136443.5-201ENST00000603741 370 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 AL162730.1-201ENST00000605734 292 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.24□□□□□ -1.89
VTA1Q9NP79 AL132822.1-201ENST00000617063 513 ntBASIC3.24□□□□□ -1.89
VTA1Q9NP79 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VTA1Q9NP79 MTND4P1-201ENST00000457501 1466 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 Y_RNA.27-201ENST00000362540 103 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 Y_RNA.358-201ENST00000365491 99 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VTA1Q9NP79 RNU7-87P-201ENST00000459343 62 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.23□□□□□ -1.89
VTA1Q9NP79 TOMM22P6-201ENST00000465035 409 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.23□□□□□ -1.89
VTA1Q9NP79 SCARNA3-201ENST00000517097 143 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms