Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC009033.1-201ENST00000624279 431 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 MTND5P6-201ENST00000422338 1798 ntBASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VIPAS39Q9H9C1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-306P-201ENST00000384617 107 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 SNORA26.3-201ENST00000391119 136 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 ZNF885P-201ENST00000420174 1098 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 CBX3P6-201ENST00000430257 527 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 ANXA2P1-201ENST00000505539 926 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 RNU4-49P-201ENST00000516080 140 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-1088P-201ENST00000516850 104 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 AC021231.3-201ENST00000558497 370 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
VIPAS39Q9H9C1 AC245060.5-201ENST00000610778 3293 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.157-201ENST00000363638 102 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 SNORD32B-201ENST00000364460 84 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 SNORD116-11-201ENST00000383882 92 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 SNORA29-201ENST00000384183 140 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-611P-201ENST00000384276 104 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.500-201ENST00000384466 111 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.505-201ENST00000384489 102 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 MIR549A-201ENST00000385268 96 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 MTCYBP2-201ENST00000407745 171 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AC012306.1-201ENST00000423267 114 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 PCMTD1P1-201ENST00000455560 355 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AC130509.1-201ENST00000464158 433 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 UBE2DNL-203ENST00000474922 222 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AC018630.3-201ENST00000542637 96 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AC026271.5-201ENST00000577873 130 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 CPDP1-201ENST00000579660 283 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 SNRPGP17-201ENST00000603780 214 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 AL133215.3-201ENST00000609801 448 ntBASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
VIPAS39Q9H9C1 U3.9-201ENST00000363823 204 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-26P-201ENST00000383985 107 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 MIR517A-201ENST00000385001 87 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 RNA5SP201-201ENST00000410316 124 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 RNA5SP118-201ENST00000410385 109 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 RNU2-41P-201ENST00000410991 178 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AL139415.2-201ENST00000431968 163 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 SNORA59A-201ENST00000459326 152 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AC114801.2-201ENST00000503825 781 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AC093259.1-201ENST00000509755 300 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AC005741.1-201ENST00000511094 432 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-864P-201ENST00000516256 108 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 CYP4A27P-201ENST00000567218 190 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 MIR8076-201ENST00000611401 83 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 AC006504.8-201ENST00000621046 635 ntBASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VIPAS39Q9H9C1 RNU6-968P-201ENST00000384076 107 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 HMGN2P39-201ENST00000398005 273 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 RNA5SP494-201ENST00000410653 129 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 RPL30P16-201ENST00000419341 429 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AL645568.3-201ENST00000433683 316 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AL353572.1-201ENST00000442490 417 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AP005660.1-201ENST00000522972 293 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC026464.5-201ENST00000562497 722 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC090517.1-201ENST00000569307 266 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AP000654.2-201ENST00000605633 586 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms