Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AP003122.5-201ENST00000527668 3766 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 RNU6-212P-201ENST00000362642 104 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.237-201ENST00000364439 102 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.458-201ENST00000384240 102 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.526-201ENST00000384572 110 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 SNORA1.3-201ENST00000384676 136 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 MIR10A-201ENST00000385043 110 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 MIR9-1-201ENST00000385198 89 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 SNORA69.1-201ENST00000390904 137 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 TMEM167AP1-201ENST00000423409 219 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC007560.1-201ENST00000426912 237 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 MTATP6P7-201ENST00000453315 681 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 RPS29P27-201ENST00000463711 170 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 RNU6-406P-201ENST00000516470 107 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 RNU6-911P-201ENST00000516523 104 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 SNORA31.21-201ENST00000517180 77 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC136932.1-201ENST00000574771 208 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 MIR4435-1-201ENST00000582552 80 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 MIR3124-201ENST00000582636 67 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 RPS29P30-201ENST00000600975 111 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC009779.6-201ENST00000603972 165 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC009318.2-201ENST00000610917 651 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AC090617.7-201ENST00000623952 126 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 GABRG2-229ENST00000641017 3628 ntBASIC2.85□□□□□ -1.95
EBF3Q9H4W6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.274-201ENST00000364714 101 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.478-201ENST00000384358 107 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 MIR181A2-201ENST00000384863 110 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 RPS4XP3-201ENST00000398541 413 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 RNA5SP21-201ENST00000410917 96 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 MTCO3P19-201ENST00000415864 321 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 AC007098.1-201ENST00000420122 367 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 MTND3P9-201ENST00000429526 346 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 AL139109.1-201ENST00000455491 297 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.84□□□□□ -1.95
EBF3Q9H4W6 AC067942.3-201ENST00000512025 362 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 SNORA31.26-201ENST00000517250 137 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 AC109479.2-201ENST00000517842 174 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 RRN3P3-201ENST00000549207 578 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 MIR8076-201ENST00000611401 83 ntBASIC2.84□□□□□ -1.95
EBF3Q9H4W6 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.96
EBF3Q9H4W6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
EBF3Q9H4W6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
EBF3Q9H4W6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.83□□□□□ -1.96
EBF3Q9H4W6 AL157777.2-201ENST00000258070 137 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 RNU6-428P-201ENST00000362942 107 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 RNU6-778P-201ENST00000363269 103 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.785-201ENST00000384290 109 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 MIR628-201ENST00000385229 95 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 MIR888-201ENST00000401186 77 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 AP000275.1-201ENST00000411943 390 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 RPL26P27-201ENST00000414397 437 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.83□□□□□ -1.96
EBF3Q9H4W6 PIGPP3-201ENST00000425307 415 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 SDAD1P3-201ENST00000427380 333 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 TOMM20P4-201ENST00000427861 435 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 U8.22-201ENST00000459141 133 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 RPL30P10-201ENST00000488148 337 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.83□□□□□ -1.96
EBF3Q9H4W6 AC006445.2-201ENST00000510061 472 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.83□□□□□ -1.96
EBF3Q9H4W6 AL161629.2-201ENST00000615347 275 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 FTX_2.1-201ENST00000618816 94 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 AC243829.7-201ENST00000633081 225 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 U6.104-201ENST00000637979 90 ntBASIC2.83□□□□□ -1.96
EBF3Q9H4W6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 Z75746.1-201ENST00000440243 2080 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.16-201ENST00000362421 102 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 RNU1-76P-201ENST00000362903 159 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.150-201ENST00000363562 102 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 RNU6-1035P-201ENST00000384477 107 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 SNORD115-46-201ENST00000390982 71 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 RNU6-700P-201ENST00000391043 107 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 SNORD58.1-201ENST00000391313 66 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AL603910.2-201ENST00000407268 136 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AC004383.1-201ENST00000438135 289 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AC013470.1-201ENST00000453438 462 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 RPL30P14-201ENST00000482744 348 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 SNORA31.1-201ENST00000515993 133 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 SNORA31.5-201ENST00000516190 133 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms