Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 USP9YP14-201ENST00000430663 563 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC002486.1-201ENST00000435098 391 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 ZNF114P1-201ENST00000453500 292 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 SNORD27.1-201ENST00000516319 72 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 Vault.3-201ENST00000516676 95 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 RNU6-567P-201ENST00000516746 107 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 DEFB131C-201ENST00000528817 165 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC090517.1-201ENST00000569307 266 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC064872.1-201ENST00000604823 1072 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AP000240.1-201ENST00000609910 452 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC040896.1-201ENST00000613819 479 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC005520.5-201ENST00000613926 164 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC008147.4-201ENST00000617570 1204 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC126177.8-201ENST00000618339 1015 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC022418.1-201ENST00000624118 445 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 AC091895.1-201ENST00000624494 256 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 U6.114-201ENST00000636407 96 ntBASIC0.67□□□□□ -2.3
VCX3BQ9H321 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
VCX3BQ9H321 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
VCX3BQ9H321 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
VCX3BQ9H321 RNU6-877P-201ENST00000383868 107 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 MIR19B1-201ENST00000384829 87 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC004965.1-201ENST00000413033 213 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 USP9YP28-201ENST00000435142 589 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC073614.1-201ENST00000438690 650 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 snoU13.26-201ENST00000459452 105 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC091435.1-201ENST00000505442 584 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 MTCO3P7-201ENST00000510008 774 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 MTATP6P9-201ENST00000515039 680 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 RNU2-46P-201ENST00000517038 113 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 RNA5SP503-201ENST00000517047 117 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 ELOCP32-201ENST00000548625 324 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 AL158827.2-201ENST00000602494 330 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AC091805.2-201ENST00000603848 235 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 Z99289.3-201ENST00000605586 594 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.66□□□□□ -2.3
VCX3BQ9H321 AL133173.2-201ENST00000614270 90 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AL078595.3-201ENST00000623815 1166 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 SNORA43.4-201ENST00000629559 138 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 AL691447.3-201ENST00000635020 330 ntBASIC0.66□□□□□ -2.3
VCX3BQ9H321 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
VCX3BQ9H321 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
VCX3BQ9H321 RNU6-534P-201ENST00000364877 106 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 Y_RNA.480-201ENST00000384364 102 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 MIR454-201ENST00000390180 115 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 MIR1289-2-201ENST00000408360 111 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 RNU4-46P-201ENST00000410818 138 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AC060773.1-201ENST00000421698 310 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 HSFY7P-201ENST00000432672 318 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AL596276.1-201ENST00000434465 418 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 HSFY8P-201ENST00000437934 318 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AC073910.1-201ENST00000445047 438 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AC079781.2-201ENST00000446424 169 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 Z73417.1-201ENST00000447373 778 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AL031274.1-201ENST00000450334 232 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.65□□□□□ -2.31
VCX3BQ9H321 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.65□□□□□ -2.31
VCX3BQ9H321 MTND2P14-201ENST00000482139 351 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AC011406.1-201ENST00000512440 370 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 FABP5P5-201ENST00000515537 406 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AP003072.2-201ENST00000527756 676 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.65□□□□□ -2.31
VCX3BQ9H321 AL442163.3-201ENST00000554110 156 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 TMF1P1-201ENST00000576058 373 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 MIR4709-201ENST00000577272 72 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 MIR3664-201ENST00000579074 99 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.65□□□□□ -2.31
VCX3BQ9H321 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.65□□□□□ -2.31
VCX3BQ9H321 AC008250.2-201ENST00000615261 205 ntBASIC0.65□□□□□ -2.31
VCX3BQ9H321 Y_RNA.132-201ENST00000363421 102 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 SNORA72.2-201ENST00000365028 127 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 RNU6-827P-201ENST00000365553 106 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 RNU6-74P-201ENST00000384235 107 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 U8.10-201ENST00000384260 133 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 Y_RNA.504-201ENST00000384481 104 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
VCX3BQ9H321 RNU11-5P-201ENST00000391216 129 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 MIR208B-201ENST00000401172 77 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 Y_RNA.598-201ENST00000410480 95 ntBASIC0.64□□□□□ -2.31
VCX3BQ9H321 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.64□□□□□ -2.31
VCX3BQ9H321 GPR143P-201ENST00000434155 205 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms