Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU2-25P-201ENST00000411041 191 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU6-1245P-201ENST00000411130 106 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 AL358075.3-201ENST00000426289 226 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.71□□□□□ -1.98
CDT1Q9H211 UBL5P3-201ENST00000475112 231 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU5B-3P-201ENST00000516601 115 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 AP005902.1-201ENST00000521358 186 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 AC103810.1-201ENST00000579873 453 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 AC113195.1-201ENST00000579952 141 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR3671-201ENST00000580455 88 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR4273-201ENST00000582824 84 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR5092-201ENST00000583139 88 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 VN1R107P-201ENST00000601784 209 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR1244-1-201ENST00000612829 85 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 AL132822.1-201ENST00000617063 513 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 AC024581.2-201ENST00000619986 252 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 7SK.10-201ENST00000621414 298 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR1244-3-201ENST00000635744 85 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR1244-2-201ENST00000636449 85 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 MIR1244-4-202ENST00000636813 85 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 HAUS6P2-201ENST00000433254 2404 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDT1Q9H211 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDT1Q9H211 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU6-874P-201ENST00000362390 105 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 RNY1P16-201ENST00000363063 111 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 Y_RNA.314-201ENST00000365114 102 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 RNU6-622P-201ENST00000384272 103 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 MIR544A-201ENST00000384855 91 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 MIR592-201ENST00000384959 97 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 RNU6-823P-201ENST00000391042 103 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 RPL19P1-201ENST00000411635 428 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.7□□□□□ -1.98
CDT1Q9H211 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.7□□□□□ -1.98
CDT1Q9H211 AC124916.1-201ENST00000444020 547 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 OSTCP8-201ENST00000445117 448 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 AL031659.1-201ENST00000447075 539 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 AL441985.1-201ENST00000457727 251 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 AP001324.2-201ENST00000461163 319 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 RPL17P19-201ENST00000489069 552 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 SNORA31.6-201ENST00000516241 130 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 RNU6-264P-201ENST00000517134 104 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.7□□□□□ -1.98
CDT1Q9H211 MIR5696-201ENST00000578474 85 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.7□□□□□ -1.98
CDT1Q9H211 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.7□□□□□ -1.98
CDT1Q9H211 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 HMGB1P24-202ENST00000615653 685 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 AC087588.2-201ENST00000617667 426 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.7□□□□□ -1.98
CDT1Q9H211 AC005592.1-201ENST00000566527 1640 ntBASIC2.7□□□□□ -1.98
CDT1Q9H211 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDT1Q9H211 Y_RNA.47-201ENST00000362697 108 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 RNU6-227P-201ENST00000362865 103 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 RNA5SP456-201ENST00000364002 114 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 RNU1-115P-201ENST00000365329 160 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 SNORA26.7-201ENST00000391288 122 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 AL359511.1-201ENST00000402970 211 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 MIR1261-201ENST00000408659 82 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 MTCYBP9-201ENST00000431021 303 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 AL121890.1-201ENST00000435457 205 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 DAP3P1-201ENST00000441522 278 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 OR2AQ1P-201ENST00000451972 200 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 RPL30P12-201ENST00000474666 353 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 AC005899.2-201ENST00000584353 90 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 RPL23AP88-201ENST00000605759 454 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 AL121655.1-201ENST00000605811 308 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 MIR8076-201ENST00000611401 83 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 CTSLP2-204ENST00000629029 392 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.69□□□□□ -1.98
CDT1Q9H211 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.69□□□□□ -1.98
CDT1Q9H211 AL606534.2-204ENST00000635008 178 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
CDT1Q9H211 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.69□□□□□ -1.98
CDT1Q9H211 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.69□□□□□ -1.98
CDT1Q9H211 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDT1Q9H211 AP006437.1-201ENST00000641440 3685 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 Y_RNA.106-201ENST00000363189 100 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 Y_RNA.193-201ENST00000363979 102 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 RNU6-487P-201ENST00000365430 104 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 SET-203ENST00000372688 801 ntTSL 2 BASIC2.68□□□□□ -1.98
CDT1Q9H211 Y_RNA.389-201ENST00000383924 113 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 RNU6-708P-201ENST00000384217 107 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 Y_RNA.455-201ENST00000384230 98 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
CDT1Q9H211 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.68□□□□□ -1.98
CDT1Q9H211 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.68□□□□□ -1.98
CDT1Q9H211 AC079354.2-201ENST00000453523 154 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 RNU7-169P-201ENST00000459456 61 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 AC010655.3-201ENST00000478818 450 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 RPL23AP70-201ENST00000483361 460 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 MTCO2P24-201ENST00000515611 426 ntBASIC2.68□□□□□ -1.98
CDT1Q9H211 ACA59.1-201ENST00000515966 143 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms