Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC034114.1-201ENST00000520293 285 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 MIR3199-1-201ENST00000582434 88 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 7SK.10-201ENST00000621414 298 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 MIR7157-201ENST00000635801 60 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 AC010329.5-201ENST00000623497 2174 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC113Q9H0I3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 RNU6-281P-201ENST00000384212 103 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 RNU6-463P-201ENST00000384340 107 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 SDAD1P3-201ENST00000427380 333 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AC006028.1-201ENST00000438379 402 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AC146507.2-201ENST00000460608 476 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 RN7SL863P-201ENST00000462370 296 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AC007215.1-201ENST00000464893 276 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 SCARNA3-201ENST00000517097 143 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 AL356575.1-201ENST00000603008 283 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 U6.92-201ENST00000636464 89 ntBASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC113Q9H0I3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 SNORD56.3-201ENST00000363507 71 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RNU6-873P-201ENST00000363833 107 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 SNORA68.1-201ENST00000364537 132 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 SNORA7.4-201ENST00000384249 137 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RNU6-713P-201ENST00000384761 107 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 MIR29B2-201ENST00000385055 81 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 MTCYBP9-201ENST00000431021 303 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 CST9LP2-201ENST00000437612 320 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RPL21P2-201ENST00000440049 481 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RPS12P18-201ENST00000442381 270 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RPS27P29-201ENST00000463110 252 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 AC092185.1-201ENST00000491371 97 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 AC010469.2-201ENST00000496412 480 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 SNORA74D-201ENST00000516404 141 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 RN7SKP282-201ENST00000516824 299 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 COX6CP5-201ENST00000527162 228 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 AC018692.3-201ENST00000623929 123 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 BX322639.1-202ENST00000423987 2213 ntBASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CCDC113Q9H0I3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 RNU6-926P-201ENST00000384075 107 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.458-201ENST00000384240 102 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 MIR549A-201ENST00000385268 96 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 MIR1289-1-201ENST00000408836 144 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 RNA5SP201-201ENST00000410316 124 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC112220.1-201ENST00000434628 355 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 IPO7P1-201ENST00000442031 636 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC104027.1-201ENST00000521887 300 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC090517.1-201ENST00000569307 266 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 MIR4659A-201ENST00000580269 81 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC010620.2-201ENST00000600135 313 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 AC010999.1-201ENST00000611856 324 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 uc_338.25-201ENST00000613756 156 ntBASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC113Q9H0I3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 RNU6-245P-201ENST00000384020 107 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 SNORA46.1-201ENST00000391069 153 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 SNORD12B-201ENST00000410433 91 ntBASIC3.49□□□□□ -1.85
CCDC113Q9H0I3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms