Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 RNU6-661P-201ENST00000362409 107 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 RN7SKP61-201ENST00000410642 295 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AL663109.1-201ENST00000411498 844 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MTCO3P38-201ENST00000468910 766 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC096745.1-201ENST00000509945 370 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC104383.1-201ENST00000530297 370 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MIR3923-201ENST00000579521 83 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MIR3941-201ENST00000582572 103 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC010928.2-201ENST00000588017 287 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC078795.3-201ENST00000602913 472 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AP001836.1-201ENST00000604675 523 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AP001330.5-201ENST00000607176 411 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 AC068944.2-201ENST00000610373 403 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 Z99129.1-201ENST00000612510 255 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MIR7843-201ENST00000622274 79 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 MTND5P26-201ENST00000426018 1752 ntBASIC1.62□□□□□ -2.15
POLR1EQ9GZS1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SNORA36A-201ENST00000384221 132 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SNORD116-2-201ENST00000384274 95 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SNORD116-6-201ENST00000384711 96 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 RNU2-66P-201ENST00000410650 161 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AC123900.1-201ENST00000420390 96 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AC078809.1-201ENST00000427601 140 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AL133396.1-201ENST00000432048 687 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 snoU13.23-201ENST00000458863 104 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 RNU1-131P-201ENST00000458943 161 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SNORA14.1-201ENST00000516113 141 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 RNU6-405P-201ENST00000516637 110 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SNORA31.17-201ENST00000516953 127 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AL356157.2-201ENST00000605122 111 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 SNORA43.4-201ENST00000629559 138 ntBASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
POLR1EQ9GZS1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AC092268.1-201ENST00000342691 405 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 RNU4-20P-201ENST00000365601 151 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 Y_RNA.378-201ENST00000365652 113 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 RNU6-38P-201ENST00000384085 107 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 MIR764-201ENST00000390811 85 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 SNORA26.3-201ENST00000391119 136 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 MTCYBP2-201ENST00000407745 171 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 RNA5SP201-201ENST00000410316 124 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 TPTE2P5-203ENST00000458118 728 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AC087441.2-201ENST00000529141 262 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AP003034.1-201ENST00000534621 422 ntBASIC1.6□□□□□ -2.15
POLR1EQ9GZS1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 U3.9-201ENST00000363823 204 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 SNORA69-201ENST00000383895 132 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 SNRPEP8-201ENST00000442866 260 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 RNU7-138P-201ENST00000459479 64 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC083798.1-201ENST00000472671 131 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC016632.1-201ENST00000503994 196 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 HMGN1P13-201ENST00000505795 138 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC025465.3-201ENST00000510570 311 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 RNA5SP401-201ENST00000515920 127 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 CENPUP1-201ENST00000526649 1202 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AP005597.4-201ENST00000526762 229 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 MIR5094-201ENST00000578766 85 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 PIGPP4-201ENST00000584447 307 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC245008.1-201ENST00000608123 476 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 MIR6863-201ENST00000636112 90 ntBASIC1.59□□□□□ -2.15
POLR1EQ9GZS1 RNU6-338P-201ENST00000383888 105 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 RNU6-259P-201ENST00000383999 107 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 RNU6-378P-201ENST00000384324 107 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AC139712.2-201ENST00000424302 339 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms