Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HERPUD2Q9BSE4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 RNU5B-2P-201ENST00000363036 113 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 DEFA7P-201ENST00000382676 285 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-306P-201ENST00000384617 107 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 MIR29C-201ENST00000385231 88 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 HMGN2P39-201ENST00000398005 273 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 MTND1P14-201ENST00000427400 950 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 AC108938.1-201ENST00000451204 136 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 HMGN1P10-201ENST00000474557 553 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 AC091951.2-201ENST00000500762 203 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 PRDX4P1-201ENST00000507189 574 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 SNORA20.3-201ENST00000516880 132 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 RNA5SP490-201ENST00000517141 136 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 MIR4273-201ENST00000582824 84 ntBASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HERPUD2Q9BSE4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 Y_RNA.61-201ENST00000362835 102 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 Y_RNA.160-201ENST00000363677 92 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 SNORD14D-201ENST00000384390 87 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 MTCO3P46-201ENST00000425787 232 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 MTND5P20-201ENST00000448677 143 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 MTND1P17-201ENST00000448961 204 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AC005668.1-201ENST00000571142 476 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 AC104260.1-201ENST00000616660 539 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HERPUD2Q9BSE4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 RNU4-76P-201ENST00000364509 141 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-438P-201ENST00000365561 103 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 snosnR66.1-201ENST00000391095 99 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 RN7SKP284-201ENST00000411002 343 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 EIF4EP2-201ENST00000422816 654 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 HMGN2P18-201ENST00000450680 270 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC087477.1-201ENST00000465747 340 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC046134.1-201ENST00000514454 666 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AC025754.2-201ENST00000606491 432 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 AL137847.3-201ENST00000611521 109 ntBASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HERPUD2Q9BSE4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 SNORD50.1-201ENST00000362987 71 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-767P-201ENST00000384132 107 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 Y_RNA.509-201ENST00000384506 99 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 MIR518C-201ENST00000384822 101 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 RPL23AP75-201ENST00000491601 451 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 RPS23P5-201ENST00000495419 428 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-875P-201ENST00000516488 106 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 Y_RNA.702-201ENST00000516843 96 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 7SK.7-201ENST00000603504 247 ntBASIC2.59□□□□□ -1.99
HERPUD2Q9BSE4 MTND5P9-201ENST00000503854 1755 ntBASIC2.59□□□□□ -2
HERPUD2Q9BSE4 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 MIR518A2-201ENST00000384966 87 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 MT-TL1-201ENST00000386347 75 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 RPS26P42-201ENST00000413485 326 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms