Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.605-201ENST00000410577 105 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 BMS1P22-201ENST00000414726 313 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 AIMP1P2-201ENST00000425294 312 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 RPL30P4-201ENST00000429309 333 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 TOMM22P6-201ENST00000465035 409 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 AC090096.1-201ENST00000489168 390 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 AC023141.11-201ENST00000508864 202 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 CYP4A27P-201ENST00000567218 190 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 RPL23AP88-201ENST00000605759 454 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 AC006157.1-201ENST00000611750 366 ntBASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.74□□□□□ -1.97
PAAF1Q9BRP4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC092435.3-201ENST00000565538 3654 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.395-201ENST00000383945 109 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 RNA5SP210-201ENST00000391034 120 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 MIR208B-201ENST00000401172 77 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 RNA5SP508-201ENST00000411327 119 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 MRPS18CP6-201ENST00000423587 223 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AL035666.1-201ENST00000446195 348 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 RPL23AP70-201ENST00000483361 460 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AF186996.7-201ENST00000492781 209 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 RNU7-4P-201ENST00000516961 62 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 RNU6-988P-201ENST00000519081 107 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC144568.1-201ENST00000520139 137 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC023442.1-201ENST00000531247 422 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC104581.2-201ENST00000572227 430 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 MIR5701-3-201ENST00000578890 82 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 MIR3171-201ENST00000584270 74 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 MIR5701-1-201ENST00000585138 82 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AL078605.1-201ENST00000603529 500 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AL353621.2-201ENST00000605340 133 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AL355802.3-201ENST00000607571 545 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 MIR5701-2-201ENST00000615634 82 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 AC138915.1-201ENST00000565427 1685 ntBASIC2.73□□□□□ -1.97
PAAF1Q9BRP4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.5-201ENST00000362334 102 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 RNU5B-2P-201ENST00000363036 113 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.112-201ENST00000363250 102 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 MIR153-2-201ENST00000385225 87 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 SNORA26.3-201ENST00000391119 136 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 U6atac.2-201ENST00000408644 118 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 MICF-203ENST00000432679 129 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 RPS15AP7-201ENST00000439294 405 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AL137792.2-201ENST00000443484 235 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 RNU7-169P-201ENST00000459456 61 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 RNA5SP380-201ENST00000517190 98 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 SNORA31.26-201ENST00000517250 137 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AC010928.2-201ENST00000588017 287 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AL138963.2-201ENST00000605137 226 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AC116312.1-201ENST00000606841 314 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 RMST_6.1-201ENST00000611980 203 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AL450472.1-202ENST00000637286 180 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 AC026241.1-201ENST00000517873 2142 ntBASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PAAF1Q9BRP4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.31-201ENST00000362574 102 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 Y_RNA.252-201ENST00000364556 101 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 MIR190B-201ENST00000401119 79 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 HMGB3P2-201ENST00000411913 584 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 OOSP1P1-201ENST00000423265 274 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 OR2AQ1P-201ENST00000451972 200 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 TRBV12-1-201ENST00000479785 344 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AL163540.1-201ENST00000485382 386 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 RN7SKP295-201ENST00000517264 153 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AP003072.1-201ENST00000531740 145 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AC020661.2-201ENST00000560114 134 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 MIR3117-201ENST00000584034 78 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 AC092447.9-201ENST00000603395 144 ntBASIC2.71□□□□□ -1.98
PAAF1Q9BRP4 SNRPGP17-201ENST00000603780 214 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms