Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RPL23AP95-201ENST00000426806 265 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AL353705.1-201ENST00000433468 480 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.9□□□□□ -1.95
TIMP4Q99727 CST9LP2-201ENST00000437612 320 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 HMGN2P10-201ENST00000448085 265 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.9□□□□□ -1.95
TIMP4Q99727 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.9□□□□□ -1.95
TIMP4Q99727 snoU13.28-201ENST00000459235 104 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 RN7SL75P-201ENST00000461926 281 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 RN7SL863P-201ENST00000462370 296 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 SERF1AP1-201ENST00000514575 187 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 RNU5B-3P-201ENST00000516601 115 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 RNA5SP380-201ENST00000517190 98 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AC027288.2-201ENST00000553028 243 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 MIR4643-201ENST00000577473 78 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 MIR2682-201ENST00000580305 110 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 BX284668.6-201ENST00000606899 438 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AL359198.2-201ENST00000611836 194 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AC068831.7-201ENST00000616954 363 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AC018692.3-201ENST00000623929 123 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.9□□□□□ -1.95
TIMP4Q99727 CUL1P1-201ENST00000509510 2425 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TIMP4Q99727 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TIMP4Q99727 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.89□□□□□ -1.95
TIMP4Q99727 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TIMP4Q99727 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
TIMP4Q99727 Y_RNA.286-201ENST00000364813 102 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
TIMP4Q99727 U8.10-201ENST00000384260 133 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 MIR10B-201ENST00000385011 110 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 RNA5SP213-201ENST00000391031 106 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 AL033519.2-201ENST00000403958 392 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 RNU6-1001P-201ENST00000411265 100 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 BPY2DP-201ENST00000422208 265 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 AC005002.2-201ENST00000438228 269 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.89□□□□□ -1.95
TIMP4Q99727 AC096638.1-201ENST00000444678 216 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 RPL39P29-201ENST00000447779 157 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 HSPE1P25-201ENST00000455484 251 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 AC016632.1-201ENST00000503994 196 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.89□□□□□ -1.95
TIMP4Q99727 RNU4-71P-201ENST00000516258 113 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TIMP4Q99727 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.89□□□□□ -1.95
TIMP4Q99727 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.89□□□□□ -1.95
TIMP4Q99727 AL391261.3-201ENST00000557194 520 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 HMGN2P15-201ENST00000585707 270 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 AL356157.2-201ENST00000605122 111 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.89□□□□□ -1.95
TIMP4Q99727 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.89□□□□□ -1.95
TIMP4Q99727 MIR3199-2-201ENST00000636243 86 ntBASIC2.89□□□□□ -1.95
TIMP4Q99727 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.89□□□□□ -1.95
TIMP4Q99727 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TIMP4Q99727 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.89□□□□□ -1.95
TIMP4Q99727 HAUS6P2-201ENST00000433254 2404 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TIMP4Q99727 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU4-90P-201ENST00000362773 141 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU6-1159P-201ENST00000362933 107 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 Y_RNA.150-201ENST00000363562 102 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU6-1141P-201ENST00000364520 107 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU6-290P-201ENST00000365212 101 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU4-61P-201ENST00000411243 107 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.88□□□□□ -1.95
TIMP4Q99727 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.88□□□□□ -1.95
TIMP4Q99727 RPS12P18-201ENST00000442381 270 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AC006445.1-201ENST00000491925 405 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RPS23P5-201ENST00000495419 428 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU5F-8P-201ENST00000515941 111 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU7-110P-201ENST00000516891 62 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 ACA59.2-201ENST00000517061 156 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 RNU6-58P-201ENST00000517143 103 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AC006199.1-201ENST00000548728 219 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.88□□□□□ -1.95
TIMP4Q99727 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.88□□□□□ -1.95
TIMP4Q99727 MIR4325-201ENST00000583049 90 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AL512605.2-201ENST00000592972 256 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AC137590.2-201ENST00000619709 240 ntBASIC2.88□□□□□ -1.95
TIMP4Q99727 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.88□□□□□ -1.95
TIMP4Q99727 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TIMP4Q99727 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.88□□□□□ -1.95
TIMP4Q99727 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TIMP4Q99727 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.88□□□□□ -1.95
TIMP4Q99727 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TIMP4Q99727 AC135776.4-201ENST00000624300 1904 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TIMP4Q99727 RBBP8P1-201ENST00000449447 1844 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 AC110491.1-201ENST00000562191 2010 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 Y_RNA.29-201ENST00000362570 113 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 RNU6-626P-201ENST00000363354 107 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 Y_RNA.200-201ENST00000364018 102 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 RNU6-281P-201ENST00000384212 103 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 SNORD63-201ENST00000384262 68 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 Y_RNA.785-201ENST00000384290 109 ntBASIC2.87□□□□□ -1.95
TIMP4Q99727 RNU6-21P-201ENST00000384710 107 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms