Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-626P-201ENST00000363354 107 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-968P-201ENST00000384076 107 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-20P-201ENST00000384106 107 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORD20-201ENST00000384550 80 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 BMS1P22-201ENST00000414726 313 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AL512844.2-201ENST00000433990 593 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AL031659.1-201ENST00000447075 539 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AL353705.4-201ENST00000449661 238 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORD2.1-201ENST00000458762 69 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 HMGB3P3-201ENST00000510526 400 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-313P-201ENST00000516317 112 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORD59.2-201ENST00000516873 68 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 RNA5SP290-201ENST00000517133 127 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AC055872.1-201ENST00000570978 278 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR3145-201ENST00000580727 82 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR4423-201ENST00000580922 80 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDK5RAP1Q96SZ6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 SRP72P2-201ENST00000344851 1979 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.272-201ENST00000364696 102 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.570-201ENST00000384750 101 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR483-201ENST00000385070 76 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 BTF3L4P2-201ENST00000392798 346 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 OOSP1P1-201ENST00000423265 274 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 WARS2P1-201ENST00000429678 537 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AL353705.1-201ENST00000433468 480 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-479P-201ENST00000516348 105 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 SNORA27.4-201ENST00000516650 95 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 RNA5SP165-201ENST00000517142 115 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 RN7SKP57-201ENST00000517248 293 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR5695-201ENST00000579717 85 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC012493.2-201ENST00000595083 291 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC037487.3-201ENST00000606668 112 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AL357075.2-201ENST00000614906 189 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC068831.7-201ENST00000616954 363 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR8057-201ENST00000620957 69 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC091895.1-201ENST00000624494 256 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 SCARNA4-201ENST00000629045 128 ntBASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP1Q96SZ6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 UBE2WP1-201ENST00000362030 340 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR410-201ENST00000362222 80 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-105P-201ENST00000363909 104 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1175P-201ENST00000365200 107 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-514P-201ENST00000384208 107 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-658P-201ENST00000384606 106 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1168P-201ENST00000390831 104 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RN7SL863P-201ENST00000462370 296 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 KC877373.1-201ENST00000479066 408 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-426P-201ENST00000516464 97 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 MIR2682-201ENST00000580305 110 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 AC108706.1-201ENST00000611053 297 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDK5RAP1Q96SZ6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.261-201ENST00000364631 102 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.441-201ENST00000384123 112 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 RNU6-417P-201ENST00000384712 107 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 Y_RNA.568-201ENST00000384742 113 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
CDK5RAP1Q96SZ6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms