Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 YPEL5P2-201ENST00000605553 359 ntBASIC2.37□□□□□ -2.03
NR1H4Q96RI1 AC009229.3-201ENST00000608056 282 ntBASIC2.37□□□□□ -2.03
NR1H4Q96RI1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 AC092794.2-201ENST00000620933 563 ntBASIC2.37□□□□□ -2.03
NR1H4Q96RI1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR1H4Q96RI1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NR1H4Q96RI1 MIR208A-201ENST00000362287 71 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 SNORD115-32-201ENST00000364079 82 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 Y_RNA.333-201ENST00000365274 102 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 RNU6-842P-201ENST00000384269 107 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 RNY3P14-201ENST00000384309 102 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 MIR32-201ENST00000384965 70 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 MIR153-2-201ENST00000385225 87 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC243428.1-201ENST00000421099 264 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 USMG5P1-201ENST00000425964 177 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 RPL23AP50-201ENST00000434149 455 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.36□□□□□ -2.03
NR1H4Q96RI1 snoU13.30-201ENST00000458951 104 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC107032.1-201ENST00000485945 480 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC091951.2-201ENST00000500762 203 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.36□□□□□ -2.03
NR1H4Q96RI1 Y_RNA.670-201ENST00000516255 105 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 RNU6-875P-201ENST00000516488 106 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AL590705.4-201ENST00000532209 134 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC022080.3-201ENST00000544433 482 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 MIR5690-201ENST00000583739 73 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AL031274.2-201ENST00000599419 203 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AC016727.1-205ENST00000605437 569 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 RMST_6.1-201ENST00000611980 203 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 AL132822.1-201ENST00000617063 513 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.36□□□□□ -2.03
NR1H4Q96RI1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.36□□□□□ -2.03
NR1H4Q96RI1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 SNORA70.4-201ENST00000365509 134 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 Y_RNA.384-201ENST00000383909 102 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNU6-301P-201ENST00000384277 107 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 Y_RNA.473-201ENST00000384333 102 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNU6-1026P-201ENST00000384465 108 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNU6-541P-201ENST00000384709 110 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNU6-370P-201ENST00000411008 104 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 SRIP3-201ENST00000413200 219 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RPS23P5-201ENST00000495419 428 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 RNA5SP490-201ENST00000517141 136 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AC009127.3-201ENST00000570531 403 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 SNRPGP20-201ENST00000604477 205 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AC007179.3-201ENST00000604976 235 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 AL008636.1-201ENST00000625038 1018 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 MIR1248-201ENST00000629190 106 ntBASIC2.35□□□□□ -2.03
NR1H4Q96RI1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NR1H4Q96RI1 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 RNU6-595P-201ENST00000363944 107 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 RNU6-438P-201ENST00000365561 103 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 SNORA40.19-201ENST00000390846 128 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 SNORA75.4-201ENST00000391278 119 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
NR1H4Q96RI1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1H4Q96RI1 HMGN2P38-201ENST00000423806 265 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1H4Q96RI1 RPL7P42-201ENST00000481005 679 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 RNA5SP137-201ENST00000516833 135 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 RNA5SP54-201ENST00000516951 92 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AC133104.2-201ENST00000615272 193 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AC104260.1-201ENST00000616660 539 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AC005562.2-201ENST00000618264 111 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 AL359697.1-201ENST00000624879 587 ntBASIC2.34□□□□□ -2.03
NR1H4Q96RI1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NR1H4Q96RI1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
NR1H4Q96RI1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NR1H4Q96RI1 SNORA11.1-201ENST00000408133 129 ntBASIC2.33□□□□□ -2.04
NR1H4Q96RI1 RNU2-48P-201ENST00000410694 191 ntBASIC2.33□□□□□ -2.04
NR1H4Q96RI1 RNU2-41P-201ENST00000410991 178 ntBASIC2.33□□□□□ -2.04
NR1H4Q96RI1 AC027124.2-201ENST00000428249 105 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms