Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP002770.2-201ENST00000543613 532 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC011471.1-201ENST00000585766 187 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC012493.2-201ENST00000595083 291 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC090425.1-201ENST00000610007 140 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 MIR8057-201ENST00000620957 69 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC130454.1-201ENST00000622948 401 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC110079.1-202ENST00000635213 138 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNX18Q96RF0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC092435.3-201ENST00000565538 3654 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX18Q96RF0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX18Q96RF0 AL035425.3-201ENST00000564206 4996 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 RNU6-212P-201ENST00000362642 104 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 SNORD114-19-201ENST00000363072 75 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 RNU6-1285P-201ENST00000363480 105 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 Y_RNA.188-201ENST00000363952 111 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 CD24P4-201ENST00000382840 243 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 RNY3P4-201ENST00000384428 101 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 RNU6-541P-201ENST00000384709 110 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 SNORA11.2-201ENST00000408318 127 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AL590135.1-201ENST00000422215 156 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC019205.3-201ENST00000424573 156 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 CBX3P6-201ENST00000430257 527 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AL445305.1-201ENST00000432577 575 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC016700.2-201ENST00000446011 156 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 RN7SL504P-201ENST00000494496 287 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 SCARNA13-201ENST00000516672 275 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 SNORA31.16-201ENST00000516773 139 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 MIR2355-201ENST00000517199 87 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC115990.1-201ENST00000526957 301 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 AL137843.1-201ENST00000605078 385 ntBASIC2.82□□□□□ -1.96
SNX18Q96RF0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX18Q96RF0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX18Q96RF0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX18Q96RF0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 RNU6-879P-201ENST00000364328 108 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 U8.10-201ENST00000384260 133 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 RNU6-611P-201ENST00000384276 104 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 RNU6-472P-201ENST00000384299 107 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 MT-TW-201ENST00000387382 68 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.81□□□□□ -1.96
SNX18Q96RF0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX18Q96RF0 AP000705.1-201ENST00000454567 350 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 LINC01399-202ENST00000458450 244 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 AC067942.3-201ENST00000512025 362 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 AC027288.2-201ENST00000553028 243 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.81□□□□□ -1.96
SNX18Q96RF0 AC021231.3-201ENST00000558497 370 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.81□□□□□ -1.96
SNX18Q96RF0 YPEL5P2-201ENST00000605553 359 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 AC011476.5-201ENST00000615594 130 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 UCA1.1-201ENST00000620952 75 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 AC093010.3-201ENST00000570269 15214 ntBASIC2.81□□□□□ -1.96
SNX18Q96RF0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX18Q96RF0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX18Q96RF0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNU6-1010P-201ENST00000362757 107 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNU6-529P-201ENST00000363383 104 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNA5SP139-201ENST00000364340 117 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 Y_RNA.307-201ENST00000365022 117 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 SNORA48.5-201ENST00000391143 135 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 MIR1302-6-201ENST00000408466 90 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNU6-121P-201ENST00000410525 99 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 SDAD1P3-201ENST00000427380 333 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 EIF1P2-201ENST00000428233 350 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AC112771.1-201ENST00000463581 102 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AC109925.1-201ENST00000478069 331 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RAC1P5-201ENST00000512182 576 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 RNU6-570P-201ENST00000517051 105 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms