Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 U2.5-201ENST00000619465 191 ntBASIC2.38□□□□□ -2.03
NEK1Q96PY6 U2.10-201ENST00000620268 191 ntBASIC2.38□□□□□ -2.03
NEK1Q96PY6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NEK1Q96PY6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NEK1Q96PY6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU6-562P-201ENST00000362731 107 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU6-1013P-201ENST00000384180 107 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU6-933P-201ENST00000384424 107 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 CBX3P9-201ENST00000402326 552 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 MIR1287-201ENST00000408492 90 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNA5SP338-201ENST00000410495 85 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU6-325P-201ENST00000411132 105 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 AL030996.1-201ENST00000411430 235 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NEK1Q96PY6 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.37□□□□□ -2.03
NEK1Q96PY6 AC091874.1-201ENST00000511402 339 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU4-49P-201ENST00000516080 140 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 AC115990.1-201ENST00000526957 301 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 AC007375.1-201ENST00000554513 578 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 SCOCP1-201ENST00000554676 349 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 AC009248.2-201ENST00000619826 254 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 AL359851.1-201ENST00000569460 4997 ntBASIC2.37□□□□□ -2.03
NEK1Q96PY6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NEK1Q96PY6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NEK1Q96PY6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 Y_RNA.212-201ENST00000364177 102 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 SNORD32A-201ENST00000364805 84 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 MIR561-201ENST00000385216 97 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 RNU6-876P-201ENST00000391295 104 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 AP000275.1-201ENST00000411943 390 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEK1Q96PY6 AC244670.1-201ENST00000436879 112 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 AL353752.1-201ENST00000454946 260 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 RNU7-187P-201ENST00000458985 68 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 MTCO1P29-201ENST00000496868 288 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 RNU6-864P-201ENST00000516256 108 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 MIR514B-201ENST00000516774 80 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 RNU6-586P-201ENST00000517265 104 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.36□□□□□ -2.03
NEK1Q96PY6 AC011712.1-201ENST00000588959 234 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 AC023043.2-201ENST00000589678 1026 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 AC009541.1-201ENST00000438279 2662 ntBASIC2.36□□□□□ -2.03
NEK1Q96PY6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
NEK1Q96PY6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-227P-201ENST00000362865 103 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 SNORD116-11-201ENST00000383882 92 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-790P-201ENST00000384479 105 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-95P-201ENST00000384697 107 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 MIR521-1-201ENST00000384902 87 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 SNORA46.1-201ENST00000391069 153 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-510P-201ENST00000391239 108 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AL590135.1-201ENST00000422215 156 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC019205.3-201ENST00000424573 156 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 USP9YP28-201ENST00000435142 589 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 IFNA20P-201ENST00000436840 528 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC016700.2-201ENST00000446011 156 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RPL31P58-201ENST00000469001 379 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC015911.1-201ENST00000495111 156 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-1053P-201ENST00000515930 101 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-1088P-201ENST00000516850 104 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 RNU6-295P-201ENST00000516901 104 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 SNORA48.11-201ENST00000517015 89 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC118273.2-201ENST00000532092 465 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC009318.2-201ENST00000610917 651 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AC063943.3-201ENST00000615562 356 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 AL162373.1-201ENST00000620433 407 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 SNORD98-201ENST00000636377 67 ntBASIC2.35□□□□□ -2.03
NEK1Q96PY6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NEK1Q96PY6 Y_RNA.151-201ENST00000363566 112 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 Y_RNA.160-201ENST00000363677 92 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 RNA5SP270-201ENST00000411361 118 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 AL645568.3-201ENST00000433683 316 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 AC009238.1-201ENST00000442165 424 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 AC009237.6-201ENST00000446969 424 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 MTND1P11-201ENST00000456661 876 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 AC130509.1-201ENST00000464158 433 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.34□□□□□ -2.03
NEK1Q96PY6 IMMP1LP2-201ENST00000552954 492 ntBASIC2.34□□□□□ -2.03
NEK1Q96PY6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.34□□□□□ -2.03
NEK1Q96PY6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.34□□□□□ -2.03
NEK1Q96PY6 SNRPGP19-201ENST00000603826 189 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms