Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-1285P-201ENST00000363480 105 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 Y_RNA.272-201ENST00000364696 102 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-1135P-201ENST00000411083 103 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 RPL39P29-201ENST00000447779 157 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 RPS29P20-201ENST00000489592 171 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 HMGB3P3-201ENST00000510526 400 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC021231.3-201ENST00000558497 370 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC055872.1-201ENST00000570978 278 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 MIR5571-201ENST00000577998 113 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC092628.2-201ENST00000622492 339 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 AL133383.2-201ENST00000622958 2336 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 RPL26P9-201ENST00000457466 433 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-155P-201ENST00000516347 100 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 RNA5SP54-201ENST00000516951 92 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 SNORA31.23-201ENST00000517219 133 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 MIR4524B-201ENST00000581569 115 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 AC022441.3-201ENST00000605737 136 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 AC004467.1-201ENST00000615678 330 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 U4.6-201ENST00000621618 127 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 AC091895.1-201ENST00000624494 256 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 snoU18.1-201ENST00000629629 71 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 MFSD8-233ENST00000641482 4860 ntBASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SYNGAP1Q96PV0 AC092268.1-201ENST00000342691 405 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 MIR423-201ENST00000362201 94 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-727P-201ENST00000363592 107 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RNA5SP167-201ENST00000365461 116 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-211P-201ENST00000384047 107 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AL512633.1-201ENST00000399931 655 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AL357139.1-201ENST00000407792 426 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 U3.39-201ENST00000408569 239 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RN7SKP53-201ENST00000411337 315 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AC012306.1-201ENST00000423267 114 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AC019205.3-201ENST00000424573 156 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AC112220.1-201ENST00000434628 355 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 IFNA11P-201ENST00000446352 526 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 SNORD2.1-201ENST00000458762 69 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-928P-201ENST00000516876 104 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AC018448.1-201ENST00000552843 316 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 uc_338.32-201ENST00000615087 172 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 MIR7112-201ENST00000616126 65 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SYNGAP1Q96PV0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 MIR888-201ENST00000401186 77 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 BTF3P11-201ENST00000426582 477 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AC078809.1-201ENST00000427601 140 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 RPS15AP5-201ENST00000436276 388 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AP000705.1-201ENST00000454567 350 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AC009163.5-201ENST00000575421 637 ntBASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNGAP1Q96PV0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 Y_RNA.343-201ENST00000365354 112 ntBASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-1130P-201ENST00000365434 107 ntBASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-1117P-201ENST00000384525 104 ntBASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 MIR186-201ENST00000384988 86 ntBASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 SNORA40.19-201ENST00000390846 128 ntBASIC3.96□□□□□ -1.77
SYNGAP1Q96PV0 SNORA48.8-201ENST00000391324 134 ntBASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 435.4 ms