Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 ARL5AP1-201ENST00000418991 388 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC123900.1-201ENST00000420390 96 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 RNU1-131P-201ENST00000458943 161 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC016256.1-201ENST00000547971 354 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 MIR3169-201ENST00000578032 83 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.84□□□□□ -2.11
ZNF560Q96MR9 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC092747.3-201ENST00000603769 301 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC064807.4-201ENST00000607201 407 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC068944.2-201ENST00000610373 403 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AL158209.2-201ENST00000619266 216 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC068792.1-201ENST00000621354 417 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 AC124864.2-201ENST00000624736 186 ntBASIC1.84□□□□□ -2.11
ZNF560Q96MR9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
ZNF560Q96MR9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZNF560Q96MR9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
ZNF560Q96MR9 LINC02555-201ENST00000563933 1951 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ZNF560Q96MR9 CBX3P1-201ENST00000325243 554 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 RNU6-1085P-201ENST00000363576 107 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 Y_RNA.409-201ENST00000383990 98 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 RNU6-378P-201ENST00000384324 107 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 SNORA48.1-201ENST00000390879 135 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 MTCO3P40-201ENST00000392516 676 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 AC009310.1-201ENST00000414414 451 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 AC012306.1-201ENST00000423267 114 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 TIMM9P3-201ENST00000428659 274 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
ZNF560Q96MR9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.83□□□□□ -2.12
ZNF560Q96MR9 Y_RNA.654-201ENST00000497848 106 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 RNU6-835P-201ENST00000516974 104 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 AP005597.4-201ENST00000526762 229 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 AL118558.2-201ENST00000556294 238 ntBASIC1.83□□□□□ -2.12
ZNF560Q96MR9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.83□□□□□ -2.12
ZNF560Q96MR9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.83□□□□□ -2.12
ZNF560Q96MR9 RNU6-227P-201ENST00000362865 103 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 Y_RNA.378-201ENST00000365652 113 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 RNU2-41P-201ENST00000410991 178 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 USP9YP14-201ENST00000430663 563 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.82□□□□□ -2.12
ZNF560Q96MR9 RNU6-1038P-201ENST00000516516 104 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 RNU6-612P-201ENST00000516909 102 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 AC104581.2-201ENST00000572227 430 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 AC009994.1-201ENST00000606889 253 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.82□□□□□ -2.12
ZNF560Q96MR9 MTND4P23-201ENST00000447723 1363 ntBASIC1.82□□□□□ -2.12
ZNF560Q96MR9 AC009541.1-201ENST00000438279 2662 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 RNU4-20P-201ENST00000365601 151 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 RNU6-1329P-201ENST00000365664 107 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 RNU6-648P-201ENST00000410190 107 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 MTCO3P41-201ENST00000414801 328 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AL358453.1-201ENST00000422522 250 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 Z83846.1-201ENST00000446798 265 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 RNU6-1208P-201ENST00000459588 107 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 RPS29P27-201ENST00000463711 170 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AC107401.1-201ENST00000503426 685 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 RNU6-323P-201ENST00000521915 107 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF560Q96MR9 MIR4769-201ENST00000584126 77 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 MIR5692C1-201ENST00000585309 91 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AC010900.2-201ENST00000604508 210 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AC064836.2-201ENST00000609491 462 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AL590240.4-201ENST00000616908 390 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AL353997.5-201ENST00000618886 171 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 AL359880.1-201ENST00000621879 266 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 OR5AK4P-201ENST00000635912 903 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 ZNF72P-201ENST00000425869 1908 ntBASIC1.81□□□□□ -2.12
ZNF560Q96MR9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ZNF560Q96MR9 SNORA36A-201ENST00000384221 132 ntBASIC1.8□□□□□ -2.12
ZNF560Q96MR9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.8□□□□□ -2.12
ZNF560Q96MR9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.8□□□□□ -2.12
ZNF560Q96MR9 MTND3P16-201ENST00000452205 344 ntBASIC1.8□□□□□ -2.12
ZNF560Q96MR9 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
ZNF560Q96MR9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.8□□□□□ -2.12
ZNF560Q96MR9 AC021146.2-201ENST00000504736 556 ntBASIC1.8□□□□□ -2.12
ZNF560Q96MR9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF560Q96MR9 ATP5EP1-201ENST00000510257 156 ntBASIC1.8□□□□□ -2.12
ZNF560Q96MR9 AC025465.4-201ENST00000513422 638 ntBASIC1.8□□□□□ -2.12
ZNF560Q96MR9 Y_RNA.693-201ENST00000516641 110 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms