Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC009994.1-201ENST00000606889 253 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AL603755.1-201ENST00000619504 163 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC136475.10-201ENST00000620253 385 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNORA43.4-201ENST00000629559 138 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RNU1-62P-201ENST00000362599 164 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RNU6-827P-201ENST00000365553 106 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RNU6-378P-201ENST00000384324 107 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RNU6-456P-201ENST00000384493 107 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RNY3P10-201ENST00000384764 102 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC139712.2-201ENST00000424302 339 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RPS27AP8-201ENST00000452665 445 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AL356010.1-201ENST00000456364 102 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 SNRPGP7-201ENST00000469016 106 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RPL26P26-201ENST00000480251 434 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC008628.2-201ENST00000502605 298 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC016632.1-201ENST00000503994 196 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC105417.1-201ENST00000514691 285 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RNU6-1098P-201ENST00000516772 96 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AP002963.1-201ENST00000530590 184 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 MIR5094-201ENST00000578766 85 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 Z94722.1-201ENST00000604328 474 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 Z98751.3-201ENST00000604447 521 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 RPL17P51-201ENST00000605218 238 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AC023510.2-201ENST00000622162 746 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 MTND4P14-201ENST00000435799 1354 ntBASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
ECHDC3Q96DC8 AL391987.6-201ENST00000305671 199 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 RNU6-552P-201ENST00000362869 119 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AC245517.4-201ENST00000448601 281 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 RNU7-167P-201ENST00000459160 62 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 HMGN1P13-201ENST00000505795 138 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AL137161.1-201ENST00000532231 390 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 CYP4A27P-201ENST00000567218 190 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 AC025449.1-201ENST00000603896 529 ntBASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
ECHDC3Q96DC8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 RNU6-414P-201ENST00000363705 104 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 RNU6-271P-201ENST00000363858 105 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 RNU6-903P-201ENST00000391270 109 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 RNU6-321P-201ENST00000410912 106 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AP000275.1-201ENST00000411943 390 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 MTCO1P21-201ENST00000416634 589 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 MTCO2P11-201ENST00000431069 680 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC245047.4-201ENST00000433189 144 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC092473.1-201ENST00000441098 221 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AL031274.1-201ENST00000450334 232 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AK3P2-201ENST00000507976 429 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC021231.3-201ENST00000558497 370 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 MTATP6P24-201ENST00000576835 677 ntBASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.27□□□□□ -2.21
ECHDC3Q96DC8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 RNU6-360P-201ENST00000390944 104 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 MIR1267-201ENST00000408723 78 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 RPS6P15-201ENST00000431996 751 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AC002486.1-201ENST00000435098 391 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 JTBP1-201ENST00000441314 247 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AC244505.5-201ENST00000443639 207 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 RPL31P3-201ENST00000458430 332 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AC010531.2-201ENST00000465012 153 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 RNU6-1053P-201ENST00000515930 101 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms