Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC103810.6-201ENST00000606708 136 ntBASIC2.37□□□□□ -2.03
SKA1Q96BD8 AL627230.6-201ENST00000611129 280 ntBASIC2.37□□□□□ -2.03
SKA1Q96BD8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.37□□□□□ -2.03
SKA1Q96BD8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SKA1Q96BD8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SKA1Q96BD8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU6-877P-201ENST00000383868 107 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU6-1286P-201ENST00000383871 107 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU6-968P-201ENST00000384076 107 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU6-332P-201ENST00000391193 108 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNA5SP494-201ENST00000410653 129 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU2-41P-201ENST00000410991 178 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 VN1R36P-201ENST00000414936 291 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA1Q96BD8 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU6-237P-201ENST00000515985 71 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 MTND1P5-201ENST00000517906 940 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SKA1Q96BD8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.36□□□□□ -2.03
SKA1Q96BD8 FGF7P1-201ENST00000582820 288 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 AC146944.4-201ENST00000602697 718 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 AL109918.3-201ENST00000603072 338 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 AC104458.1-201ENST00000608243 463 ntBASIC2.36□□□□□ -2.03
SKA1Q96BD8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SKA1Q96BD8 RNA5SP432-201ENST00000362480 116 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 RNU4-12P-201ENST00000365233 139 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 SNORA29-201ENST00000384183 140 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 Y_RNA.450-201ENST00000384198 113 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 RNU6-1026P-201ENST00000384465 108 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 Y_RNA.554-201ENST00000384672 102 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 MIR597-201ENST00000384968 97 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 AC123900.1-201ENST00000420390 96 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 RNU7-14P-201ENST00000459331 62 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 RPS23P5-201ENST00000495419 428 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 MIR514B-201ENST00000516774 80 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA1Q96BD8 SNRPGP18-201ENST00000553000 214 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 AC026464.5-201ENST00000562497 722 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 MIR4299-201ENST00000577899 72 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 MIR4524B-201ENST00000581569 115 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 CTHRC1P1-201ENST00000605383 469 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 AC024614.3-201ENST00000637860 256 ntBASIC2.35□□□□□ -2.03
SKA1Q96BD8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
SKA1Q96BD8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
SKA1Q96BD8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SKA1Q96BD8 LINC02555-201ENST00000563933 1951 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 RNU6-1252P-201ENST00000363054 104 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 SNORA32.2-201ENST00000384049 122 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 RNU6-1215P-201ENST00000384441 102 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 AC009161.1-201ENST00000417306 376 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 WARS2P1-201ENST00000429678 537 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 USP9YP28-201ENST00000435142 589 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 AC096638.1-201ENST00000444678 216 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 AL035666.1-201ENST00000446195 348 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 MRPS17P9-201ENST00000511924 393 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 Y_RNA.655-201ENST00000515919 96 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 RNU6-1098P-201ENST00000516772 96 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 AL773524.1-201ENST00000614065 229 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 AL160394.1-201ENST00000624765 724 ntBASIC2.34□□□□□ -2.03
SKA1Q96BD8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
SKA1Q96BD8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
SKA1Q96BD8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SKA1Q96BD8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SKA1Q96BD8 RNU6-790P-201ENST00000384479 105 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SKA1Q96BD8 snoU13.6-201ENST00000458785 104 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 FAM206BP-201ENST00000510179 541 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 AC087441.2-201ENST00000529141 262 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.33□□□□□ -2.04
SKA1Q96BD8 AL133215.3-201ENST00000609801 448 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 RMST_3.1-201ENST00000611651 109 ntBASIC2.33□□□□□ -2.04
SKA1Q96BD8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNU1-76P-201ENST00000362903 159 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNU5B-2P-201ENST00000363036 113 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNA5SP493-201ENST00000364115 91 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 SNORD31B-201ENST00000364977 69 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 Y_RNA.414-201ENST00000384011 101 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 Y_RNA.516-201ENST00000384541 124 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 SNORA8-201ENST00000384574 139 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 AL356432.1-201ENST00000405809 419 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNA5SP118-201ENST00000410385 109 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RPS26P42-201ENST00000413485 326 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.32□□□□□ -2.04
SKA1Q96BD8 AC244636.1-201ENST00000421152 228 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms