Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AL714022.1-201ENST00000439897 151 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AL133162.1-201ENST00000463228 453 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AP005660.1-201ENST00000522972 293 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AL356575.1-201ENST00000603008 283 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AL137843.1-201ENST00000605078 385 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AL008718.3-201ENST00000610217 321 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 AL591424.2-201ENST00000617023 128 ntBASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.32□□□□□ -1.72
VTI1AQ96AJ9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 AC010680.1-201ENST00000590024 3590 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 Y_RNA.291-201ENST00000364886 113 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 MIR613-201ENST00000385248 95 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 U3.39-201ENST00000408569 239 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 RNU2-54P-201ENST00000410299 190 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 AL451074.5-201ENST00000415894 435 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 PTGES3P4-201ENST00000426243 356 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 AC083863.1-201ENST00000438811 231 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 HMGB3P3-201ENST00000510526 400 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 SCARNA14-201ENST00000516903 136 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 U6.105-201ENST00000637379 88 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 ZNF962P-201ENST00000443465 3140 ntBASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.31□□□□□ -1.72
VTI1AQ96AJ9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AC103988.1-201ENST00000566382 2177 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 RNU1-62P-201ENST00000362599 164 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 RNU6-704P-201ENST00000364162 103 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 RNU6-19P-201ENST00000384718 107 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 RNVU1-14-201ENST00000384770 164 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AC009963.1-201ENST00000417265 157 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AC010099.1-201ENST00000455434 375 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 RNU6-711P-201ENST00000517255 106 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AL360157.1-201ENST00000565962 87 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AC244505.7-201ENST00000599675 272 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AL034555.1-201ENST00000604816 211 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 AC004832.4-201ENST00000608952 331 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 MIR3674-201ENST00000636576 68 ntBASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1AQ96AJ9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 RNU6-1272P-201ENST00000362776 107 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AL357139.1-201ENST00000407792 426 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 RNU2-49P-201ENST00000410666 184 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 RNU5E-9P-201ENST00000411164 104 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AC107626.1-201ENST00000471084 183 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AC105137.2-201ENST00000569073 466 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 MIR5692C2-201ENST00000577959 77 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 MIR3923-201ENST00000579521 83 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 MIR5187-201ENST00000583479 76 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 MIR5195-201ENST00000583555 115 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 AL162713.1-201ENST00000604480 262 ntBASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VTI1AQ96AJ9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 MAPK10-253ENST00000641010 4072 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 Y_RNA.415-201ENST00000384012 112 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 SNORA18.3-201ENST00000384122 132 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 RNU6-748P-201ENST00000384648 107 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 RNA5SP164-201ENST00000516533 110 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 SNORD19.2-201ENST00000516978 73 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 TGIF1P1-201ENST00000558095 802 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 RPS15AP11-201ENST00000594193 385 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 MIR7975-201ENST00000619350 68 ntBASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.28□□□□□ -1.72
VTI1AQ96AJ9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms