Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RPS15AP7-201ENST00000439294 405 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 AP001324.2-201ENST00000461163 319 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 SNRPGP7-201ENST00000469016 106 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 RPL30P12-201ENST00000474666 353 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 MRPS36P2-201ENST00000512569 299 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 SMURF2P1-201ENST00000514992 481 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 SNORA31.6-201ENST00000516241 130 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 MIR5696-201ENST00000578474 85 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 AC024581.2-201ENST00000619986 252 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
TM9SF4Q92544 AC009541.1-201ENST00000438279 2662 ntBASIC2.35□□□□□ -2.03
TM9SF4Q92544 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 ZNF658B-202ENST00000615961 3375 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 SNORA63-201ENST00000363450 132 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 Y_RNA.148-201ENST00000363557 117 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 SNORA22B-201ENST00000383876 138 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 RNU6-784P-201ENST00000384330 106 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 AC018865.2-201ENST00000423631 129 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 AL118496.2-201ENST00000448300 230 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 AC107626.1-201ENST00000471084 183 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 AC105758.1-201ENST00000506038 399 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 RNU6-976P-201ENST00000516086 111 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 CKS1BP7-201ENST00000522230 235 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 AL355877.2-201ENST00000603670 358 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 CYP2C61P-201ENST00000604072 290 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 AC040896.1-201ENST00000613819 479 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 AC007485.1-201ENST00000616755 206 ntBASIC2.34□□□□□ -2.03
TM9SF4Q92544 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF4Q92544 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TM9SF4Q92544 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
TM9SF4Q92544 HAUS6P2-201ENST00000433254 2404 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TM9SF4Q92544 ZNF299P-201ENST00000406845 1804 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TM9SF4Q92544 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
TM9SF4Q92544 Y_RNA.40-201ENST00000362645 93 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RNY1P16-201ENST00000363063 111 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RNU6-99P-201ENST00000364721 107 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RNU6-487P-201ENST00000365430 104 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 SNORA36A-201ENST00000384221 132 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 MIR147B-201ENST00000390185 80 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 BTF3L4P2-201ENST00000392798 346 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RNU6-1245P-201ENST00000411130 106 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AL356320.1-201ENST00000429616 163 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 MTCO3P29-201ENST00000432119 779 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AL163540.1-201ENST00000485382 386 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RPL30P1-201ENST00000488676 339 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 GZMAP1-201ENST00000503054 631 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AC114801.2-201ENST00000503825 781 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 SCARNA17.1-201ENST00000516211 143 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 SCARNA17.2-201ENST00000516334 143 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF4Q92544 MIR5701-3-201ENST00000578890 82 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AC005899.2-201ENST00000584353 90 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 MIR5701-1-201ENST00000585138 82 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF4Q92544 Y_RNA.812-201ENST00000610788 101 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 Y_RNA.784-201ENST00000613803 101 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 SCARNA17.4-201ENST00000614296 143 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 MIR5701-2-201ENST00000615634 82 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 Y_RNA.787-201ENST00000616522 101 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 Y_RNA.780-201ENST00000617336 101 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 Y_RNA.801-201ENST00000619005 101 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AC091925.1-201ENST00000623204 462 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 AL450472.1-202ENST00000637286 180 ntBASIC2.33□□□□□ -2.04
TM9SF4Q92544 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TM9SF4Q92544 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.32□□□□□ -2.04
TM9SF4Q92544 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.32□□□□□ -2.04
TM9SF4Q92544 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TM9SF4Q92544 RNU6-874P-201ENST00000362390 105 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 RNU6-595P-201ENST00000363944 107 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 RNU6-461P-201ENST00000364195 107 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 Y_RNA.252-201ENST00000364556 101 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF4Q92544 MCFD2P1-201ENST00000417812 300 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 AC008267.5-201ENST00000424928 265 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 Z82188.1-201ENST00000436709 154 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.32□□□□□ -2.04
TM9SF4Q92544 AL035666.1-201ENST00000446195 348 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 RPL39P29-201ENST00000447779 157 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 AL353705.4-201ENST00000449661 238 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 snoU13.26-201ENST00000459452 105 ntBASIC2.32□□□□□ -2.04
TM9SF4Q92544 AC068781.1-201ENST00000488231 618 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms