Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RNU6-567P-201ENST00000516746 107 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AC027288.2-201ENST00000553028 243 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AC004817.2-201ENST00000561794 651 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AC090517.1-201ENST00000569307 266 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 MIR3200-201ENST00000580767 85 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 MIR3136-201ENST00000583498 78 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AL078605.1-201ENST00000603529 500 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RAC1P9-201ENST00000604990 392 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 uc_338.14-201ENST00000613162 166 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 U4.1-201ENST00000620349 87 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 SNORD98-201ENST00000636377 67 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 RNU6-799P-201ENST00000363567 107 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 RNU6-137P-201ENST00000363680 108 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 UBA52P6-201ENST00000399822 382 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 RPS26P42-201ENST00000413485 326 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC012306.1-201ENST00000423267 114 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC022018.1-201ENST00000430685 241 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 RPEP5-201ENST00000441137 268 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 snoU13.6-201ENST00000458785 104 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC006483.1-201ENST00000487308 313 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AIG1P1-201ENST00000503376 148 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 SNORA25.11-201ENST00000515935 105 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AL161670.1-201ENST00000554348 137 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 AC110079.1-202ENST00000635213 138 ntBASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATG4AQ8WYN0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 MIR422A-201ENST00000362286 90 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 RNU6-529P-201ENST00000363383 104 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 SNORD115-8-201ENST00000363856 82 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 SNORD115-38-201ENST00000365037 82 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 RNU6-541P-201ENST00000384709 110 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 SNORA48.5-201ENST00000391143 135 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AC009414.1-201ENST00000427200 443 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 SDAD1P3-201ENST00000427380 333 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 EIF1P2-201ENST00000428233 350 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AC022868.1-201ENST00000517767 391 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 HSPE1P20-201ENST00000538133 289 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 MIR3605-201ENST00000583214 100 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AL138963.2-201ENST00000605137 226 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AL121655.1-201ENST00000605811 308 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 U6.92-201ENST00000636464 89 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4AQ8WYN0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AC091564.4-201ENST00000533934 2194 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AL109809.4-201ENST00000603520 2185 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 RNU4-56P-201ENST00000364700 142 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 RNA5SP213-201ENST00000391031 106 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 RNU1-101P-201ENST00000391171 127 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AL512633.1-201ENST00000399931 655 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AL731563.1-201ENST00000442202 214 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AC010469.2-201ENST00000496412 480 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 HMGB1P35-201ENST00000503360 598 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 RNU6-397P-201ENST00000516226 104 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms