Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 DEFB131E-202ENST00000602581 683 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL353765.1-201ENST00000605514 183 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL359547.2-201ENST00000615810 418 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 RNU6-78P-201ENST00000362897 107 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 RPL31P35-201ENST00000431058 377 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 MTCYBP39-201ENST00000437562 491 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 MTCO3P18-201ENST00000440206 761 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC245047.7-201ENST00000440265 293 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC010531.2-201ENST00000465012 153 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 MTCO3P7-201ENST00000510008 774 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 RNU5F-4P-201ENST00000516581 114 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC087883.1-201ENST00000551882 391 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC021231.3-201ENST00000558497 370 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 MTATP6P2-201ENST00000603319 678 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL596327.1-201ENST00000603629 213 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL158032.1-201ENST00000605401 106 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC131159.1-201ENST00000621854 213 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL163152.1-201ENST00000642001 374 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 Y_RNA.132-201ENST00000363421 102 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 RNU6-560P-201ENST00000364007 108 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 RNU6-621P-201ENST00000364752 109 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 SNORA80D-201ENST00000384488 135 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
RTL9Q8NET4 AF228730.1-201ENST00000397972 663 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 USP9YP11-201ENST00000427537 717 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.31□□□□□ -2.36
RTL9Q8NET4 MTND4P15-201ENST00000437913 1033 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.31□□□□□ -2.36
RTL9Q8NET4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.31□□□□□ -2.36
RTL9Q8NET4 AC016925.1-201ENST00000458303 298 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 HMGN1P12-201ENST00000499125 195 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
RTL9Q8NET4 RNU2-10P-201ENST00000516375 211 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 RNA5SP476-201ENST00000516613 103 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 RNU6-1098P-201ENST00000516772 96 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AC087894.1-201ENST00000538359 518 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.31□□□□□ -2.36
RTL9Q8NET4 MTND3P13-201ENST00000574391 343 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.31□□□□□ -2.36
RTL9Q8NET4 MIR3146-201ENST00000580367 79 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AC005776.1-201ENST00000603164 290 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AL031281.1-201ENST00000604049 488 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 AC068880.4-201ENST00000623082 495 ntBASIC0.31□□□□□ -2.36
RTL9Q8NET4 RNU6-511P-201ENST00000363496 107 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 RNU5E-7P-201ENST00000365290 117 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
RTL9Q8NET4 RNU6-877P-201ENST00000383868 107 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 MTCYBP2-201ENST00000407745 171 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 RNU6-1245P-201ENST00000411130 106 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 AL117351.1-201ENST00000438864 766 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 HMGN1P10-201ENST00000474557 553 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 AP002453.2-201ENST00000533503 320 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 APOOP3-201ENST00000536787 586 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.3□□□□□ -2.36
RTL9Q8NET4 AC131235.4-201ENST00000609288 620 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 AC097372.5-201ENST00000623665 376 ntBASIC0.3□□□□□ -2.36
RTL9Q8NET4 RNU4-56P-201ENST00000364700 142 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 RNU6-969P-201ENST00000383900 105 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 RNU6-1026P-201ENST00000384465 108 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 AC060773.1-201ENST00000421698 310 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 SNRPGP7-201ENST00000469016 106 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 AC105758.1-201ENST00000506038 399 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 AC011406.1-201ENST00000512440 370 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 RNA5SP395-201ENST00000516567 118 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.29□□□□□ -2.36
RTL9Q8NET4 AC012507.3-201ENST00000603556 477 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 AL513534.2-201ENST00000603836 250 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 AC012557.2-201ENST00000605919 418 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 AL354696.1-201ENST00000614652 497 ntBASIC0.29□□□□□ -2.36
RTL9Q8NET4 MTND4P14-201ENST00000435799 1354 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 RNU6-534P-201ENST00000364877 106 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 SNORA72.2-201ENST00000365028 127 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 Y_RNA.458-201ENST00000384240 102 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 MIR578-201ENST00000384828 96 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 RPL23AP95-201ENST00000426806 265 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 RPS25P9-201ENST00000435591 252 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.28□□□□□ -2.36
RTL9Q8NET4 AC079395.1-201ENST00000510981 262 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 AC109445.1-201ENST00000512356 383 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 LRRC6P1-201ENST00000532188 885 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 ZNF321P-202ENST00000550843 495 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 Z83818.1-201ENST00000603584 150 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 RNU6-88P-201ENST00000606801 100 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 AP001596.2-201ENST00000608410 312 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 AC021506.2-201ENST00000612354 169 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 SNORD3E-202ENST00000627253 216 ntBASIC0.28□□□□□ -2.36
RTL9Q8NET4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.28□□□□□ -2.36
RTL9Q8NET4 AC103706.2-201ENST00000638080 240 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms