Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-342P-201ENST00000384521 104 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 MRPL42P2-201ENST00000403169 426 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AL117342.1-201ENST00000404861 406 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 RNU2-7P-201ENST00000410794 178 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 RNU6-1245P-201ENST00000411130 106 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 MTCO1P21-201ENST00000416634 589 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 MTCO2P23-201ENST00000425216 680 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC132479.1-201ENST00000449160 144 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 ATP5J2P3-201ENST00000451550 258 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC013470.1-201ENST00000453438 462 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC016925.1-201ENST00000458303 298 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC010531.2-201ENST00000465012 153 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 RNU6-377P-201ENST00000515965 102 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 RNU6-1098P-201ENST00000516772 96 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 RNA5SP481-201ENST00000516814 122 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 SNORD60.2-201ENST00000516883 86 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AP001893.2-201ENST00000526949 202 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 CBX3P8-201ENST00000532412 525 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 ZNF321P-202ENST00000550843 495 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 PCMTD1P2-201ENST00000565017 355 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 BNIP3P16-201ENST00000589779 534 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AL590229.1-201ENST00000603497 542 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC008945.2-201ENST00000606056 604 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 MIR3976-201ENST00000606807 139 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 PCGEM1.1-201ENST00000613431 131 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC136475.10-201ENST00000620253 385 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 AC099654.13-201ENST00000639774 207 ntBASIC0.85□□□□□ -2.27
CCDC112Q8NEF3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 RNU6-428P-201ENST00000362942 107 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 RNU6-179P-201ENST00000363350 107 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 U3.4-201ENST00000363352 213 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 RNU6-336P-201ENST00000364891 107 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 SNORD31B-201ENST00000364977 69 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AL008987.1-201ENST00000415528 237 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC078809.1-201ENST00000427601 140 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 SNRPGP7-201ENST00000469016 106 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC092991.1-201ENST00000477176 376 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC116562.3-201ENST00000506136 177 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC104136.1-201ENST00000512969 394 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 SCARNA24.1-201ENST00000516465 137 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC068587.5-201ENST00000528506 175 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AC008088.1-201ENST00000580993 280 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 AL365434.2-201ENST00000607979 234 ntBASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC112Q8NEF3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC112Q8NEF3 RNU6-169P-201ENST00000365336 107 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 RNU6-116P-201ENST00000384042 109 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 RNU6-17P-201ENST00000384245 107 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 RNU6-18P-201ENST00000384527 107 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 SNORA26.3-201ENST00000391119 136 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 HIGD1AP15-201ENST00000416198 280 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 ARL5AP1-201ENST00000418991 388 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AL512286.1-201ENST00000439244 400 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 RNU7-14P-201ENST00000459331 62 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC023050.3-201ENST00000541142 333 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 SNORA59B-202ENST00000578183 701 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 MIR3923-201ENST00000579521 83 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 CTHRC1P1-201ENST00000605383 469 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC027807.2-201ENST00000616099 408 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC009159.2-201ENST00000617603 606 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC010608.3-201ENST00000625048 527 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AL450472.1-202ENST00000637286 180 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 AC006927.3-201ENST00000638789 384 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 MTND4P9-201ENST00000507819 1346 ntBASIC0.83□□□□□ -2.28
CCDC112Q8NEF3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 U3.9-201ENST00000363823 204 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 RNU6-378P-201ENST00000384324 107 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 MIR7-2-201ENST00000384970 110 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 AC013410.2-201ENST00000422627 201 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 GTF2IP13-201ENST00000438487 386 ntBASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC112Q8NEF3 GAPDHP17-201ENST00000449858 1001 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms