Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR4637-201ENST00000582405 84 ntBASIC-0.46□□□□□ -2.48
VPS8Q8N3P4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 MIR520F-201ENST00000384824 87 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 SNORA75.2-201ENST00000391138 150 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 SNORA75.3-201ENST00000391231 150 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 SNORA40.12-201ENST00000516329 111 ntBASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS8Q8N3P4 MIR340-201ENST00000362125 95 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 RNU6-815P-201ENST00000384080 113 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 RNU6-114P-201ENST00000384704 105 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 AC243964.1-201ENST00000441814 261 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 SNORA25.12-201ENST00000516202 82 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 AC009902.1-201ENST00000519351 183 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 MIR5695-201ENST00000579717 85 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 BNIP3P9-201ENST00000603714 553 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 AC106754.2-201ENST00000623006 233 ntBASIC-0.47□□□□□ -2.49
VPS8Q8N3P4 AL390237.1-201ENST00000404226 1415 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 RNU6-839P-201ENST00000363347 108 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 SNORA27.3-201ENST00000364937 134 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 MIR938-201ENST00000401216 83 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 BX119904.4-201ENST00000424402 301 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 AL606517.1-201ENST00000446914 387 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 RPL18AP17-201ENST00000455326 198 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 MTND2P7-201ENST00000521337 640 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 AC092634.7-201ENST00000621022 103 ntBASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS8Q8N3P4 SNORA25.3-201ENST00000363205 127 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AC027644.1-201ENST00000419595 298 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AC092427.1-201ENST00000439177 601 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AC116347.2-201ENST00000514912 523 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AC023538.1-201ENST00000534576 736 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 AC136475.10-201ENST00000620253 385 ntBASIC-0.49□□□□□ -2.49
VPS8Q8N3P4 RNU6-39P-201ENST00000384344 107 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 RNU6-177P-201ENST00000411257 104 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 AC104332.1-201ENST00000440471 797 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 AP000797.1-201ENST00000478870 387 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 TPRKBP2-201ENST00000565969 475 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 AC104408.1-201ENST00000605241 170 ntBASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.5□□□□□ -2.49
VPS8Q8N3P4 MTND4P5-201ENST00000435821 1374 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 RN7SKP142-201ENST00000411236 328 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 AC027338.1-201ENST00000514840 825 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 BNIP3P26-201ENST00000600827 554 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 AC092447.9-201ENST00000603395 144 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 AC080078.2-201ENST00000603766 501 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 MTND5P32-201ENST00000560711 1802 ntBASIC-0.51□□□□□ -2.49
VPS8Q8N3P4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 SNORA70.12-201ENST00000516084 153 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 RN7SKP287-201ENST00000516546 266 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 AC091163.3-201ENST00000518269 1144 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 AC064807.4-201ENST00000607201 407 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.52□□□□□ -2.49
VPS8Q8N3P4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 AC114981.1-201ENST00000503897 678 ntBASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 AC074198.2-201ENST00000508153 258 ntBASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 AC008147.4-201ENST00000617570 1204 ntBASIC-0.53□□□□□ -2.49
VPS8Q8N3P4 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 MIR224-201ENST00000384889 81 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 SNORA40C-201ENST00000391285 128 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 SNORD71-201ENST00000411292 86 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 RPS26P42-201ENST00000413485 326 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 AC016831.2-201ENST00000417179 352 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 AC025678.1-201ENST00000567861 338 ntBASIC-0.54□□□□□ -2.5
VPS8Q8N3P4 RNU4-9P-201ENST00000364951 139 ntBASIC-0.55□□□□□ -2.5
VPS8Q8N3P4 SNORA72.2-201ENST00000365028 127 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms