Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNA5SP490-201ENST00000517141 136 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AL118558.2-201ENST00000556294 238 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC073648.5-201ENST00000603502 305 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC017083.3-201ENST00000609955 700 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 U1.36-201ENST00000620684 176 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 MTND4P14-201ENST00000435799 1354 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AC092268.1-201ENST00000342691 405 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 Y_RNA.1-201ENST00000352915 104 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RNU6-457P-201ENST00000363999 107 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RNU6-160P-201ENST00000384591 107 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 Y_RNA.582-201ENST00000391023 95 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RNU2-41P-201ENST00000410991 178 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AP000275.1-201ENST00000411943 390 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 SDAD1P3-201ENST00000427380 333 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 HMGB1P18-201ENST00000438801 619 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 MTCO2P3-201ENST00000442543 421 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 FO393415.2-201ENST00000480085 343 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AC008628.2-201ENST00000502605 298 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RPL39P5-202ENST00000512505 151 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RN7SKP298-201ENST00000515950 94 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 SNORA14.1-201ENST00000516113 141 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AC069113.1-201ENST00000517763 267 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 MTND4P7-201ENST00000523876 130 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 MIR4298-201ENST00000584380 73 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 PRR13P7-201ENST00000605538 430 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AC007684.1-201ENST00000609671 477 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 RMST_6.1-201ENST00000611980 203 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 AC090582.1-201ENST00000636321 199 ntBASIC1.55□□□□□ -2.16
CCDC65Q8IXS2 LINC02555-201ENST00000563933 1951 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AL357139.1-201ENST00000407792 426 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AC123900.1-201ENST00000420390 96 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 FTH1P25-201ENST00000447665 469 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 RPS29P27-201ENST00000463711 170 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 MTCO3P38-201ENST00000468910 766 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 RPS3AP17-201ENST00000472594 777 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 Y_RNA.688-201ENST00000516565 95 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 SUB1P4-201ENST00000566062 339 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AC109446.1-201ENST00000566172 220 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 MIR3923-201ENST00000579521 83 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 VN1R80P-201ENST00000597126 338 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 CYP2C61P-201ENST00000604072 290 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 Z98751.3-201ENST00000604447 521 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AP001330.5-201ENST00000607176 411 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 AC005520.5-201ENST00000613926 164 ntBASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC65Q8IXS2 CBX3P1-201ENST00000325243 554 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 RNU6-23P-201ENST00000363283 107 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 RNU6-38P-201ENST00000384085 107 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 U8.10-201ENST00000384260 133 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 Y_RNA.504-201ENST00000384481 104 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 RNA5SP219-201ENST00000390940 113 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 RNU1-131P-201ENST00000458943 161 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 RNU7-138P-201ENST00000459479 64 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC130509.1-201ENST00000464158 433 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 TOMM22P6-201ENST00000465035 409 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC010409.1-201ENST00000487382 476 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC016632.1-201ENST00000503994 196 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC005741.1-201ENST00000511094 432 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC010493.1-201ENST00000513479 292 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AP005597.4-201ENST00000526762 229 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 EIF4A1P12-201ENST00000551910 141 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC008269.2-201ENST00000561915 1105 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC004223.2-201ENST00000590309 544 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 ZNF209P-201ENST00000593450 2304 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AC009994.1-201ENST00000606889 253 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AL353997.5-201ENST00000618886 171 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.53□□□□□ -2.16
CCDC65Q8IXS2 Y_RNA.167-201ENST00000363735 109 ntBASIC1.52□□□□□ -2.17
CCDC65Q8IXS2 U3.9-201ENST00000363823 204 ntBASIC1.52□□□□□ -2.17
CCDC65Q8IXS2 RNU4-20P-201ENST00000365601 151 ntBASIC1.52□□□□□ -2.17
CCDC65Q8IXS2 RNU6-1119P-201ENST00000384349 108 ntBASIC1.52□□□□□ -2.17
CCDC65Q8IXS2 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
CCDC65Q8IXS2 AL606923.1-201ENST00000406616 190 ntBASIC1.52□□□□□ -2.17
CCDC65Q8IXS2 AL663109.1-201ENST00000411498 844 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms