Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 AC023824.2-201ENST00000566185 400 ntBASIC2.55□□□□□ -2
DHX40Q8IX18 MIR5571-201ENST00000577998 113 ntBASIC2.55□□□□□ -2
DHX40Q8IX18 AC011494.1-201ENST00000596454 237 ntBASIC2.55□□□□□ -2
DHX40Q8IX18 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
DHX40Q8IX18 SNORA43.4-201ENST00000629559 138 ntBASIC2.55□□□□□ -2
DHX40Q8IX18 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.54□□□□□ -2
DHX40Q8IX18 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
DHX40Q8IX18 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DHX40Q8IX18 RNU1-72P-201ENST00000362976 153 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 RNU6-1297P-201ENST00000384415 104 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 Y_RNA.594-201ENST00000410373 140 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 RNU4-14P-201ENST00000410858 122 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.54□□□□□ -2
DHX40Q8IX18 SNRPGP7-201ENST00000469016 106 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 RNU6-559P-201ENST00000516151 98 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 RNU6-567P-201ENST00000516746 107 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.54□□□□□ -2
DHX40Q8IX18 AC109446.1-201ENST00000566172 220 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 AL355375.2-201ENST00000574825 175 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.54□□□□□ -2
DHX40Q8IX18 MIR5690-201ENST00000583739 73 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 AP000654.2-201ENST00000605633 586 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 AC009318.2-201ENST00000610917 651 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 AC112487.2-201ENST00000637950 304 ntBASIC2.54□□□□□ -2
DHX40Q8IX18 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.53□□□□□ -2
DHX40Q8IX18 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.53□□□□□ -2
DHX40Q8IX18 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 SNORD50.1-201ENST00000362987 71 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 RNU4-56P-201ENST00000364700 142 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 U3.13-201ENST00000364804 214 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 Y_RNA.504-201ENST00000384481 104 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 Z82205.1-201ENST00000428456 297 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.53□□□□□ -2
DHX40Q8IX18 GPM6BP3-201ENST00000442797 145 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 AC079354.2-201ENST00000453523 154 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.53□□□□□ -2
DHX40Q8IX18 MIR4273-201ENST00000582824 84 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
DHX40Q8IX18 PISRT1.1-201ENST00000616930 107 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 AC104985.2-201ENST00000620598 500 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 SNORD98-201ENST00000636377 67 ntBASIC2.53□□□□□ -2
DHX40Q8IX18 KPNA2P1-201ENST00000458289 1591 ntBASIC2.53□□□□□ -2.01
DHX40Q8IX18 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
DHX40Q8IX18 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DHX40Q8IX18 MIRLET7G-201ENST00000362280 84 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNU4-73P-201ENST00000363164 141 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNU6-1286P-201ENST00000383871 107 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNU6-842P-201ENST00000384269 107 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 MTCYBP4-201ENST00000401524 249 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNA5SP425-201ENST00000410336 112 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNU6-370P-201ENST00000411008 104 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 Y_RNA.670-201ENST00000516255 105 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 RNU6-307P-201ENST00000516743 106 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 MIR5696-201ENST00000578474 85 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC005899.2-201ENST00000584353 90 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 C8orf59P2-201ENST00000603441 271 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AC009229.3-201ENST00000608056 282 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AL359697.1-201ENST00000624879 587 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AL450472.1-202ENST00000637286 180 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AP000553.5-201ENST00000641933 54 ntBASIC2.52□□□□□ -2.01
DHX40Q8IX18 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
DHX40Q8IX18 MTND5P9-201ENST00000503854 1755 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 RNU6-1059P-201ENST00000363752 98 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 RNU6-1188P-201ENST00000363795 107 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 RNU6-968P-201ENST00000384076 107 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 Y_RNA.490-201ENST00000384413 102 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 MIR29B2-201ENST00000385055 81 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 SNORA75.4-201ENST00000391278 119 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 RNU4-53P-201ENST00000410828 140 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 USMG5P1-201ENST00000425964 177 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.51□□□□□ -2.01
DHX40Q8IX18 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.51□□□□□ -2.01
DHX40Q8IX18 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.51□□□□□ -2.01
DHX40Q8IX18 CYP2C59P-201ENST00000457790 269 ntBASIC2.51□□□□□ -2.01
DHX40Q8IX18 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
DHX40Q8IX18 snoU13.23-201ENST00000458863 104 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms