Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC145146.1-201ENST00000496370 254 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 FCF1P8-201ENST00000510322 597 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 RNU6-589P-201ENST00000516485 107 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 RNA5SP73-201ENST00000516744 108 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 AC026403.1-201ENST00000518938 295 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 AC109810.1-201ENST00000534066 224 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 LARP7P3-201ENST00000579888 337 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF135Q8IUD6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF135Q8IUD6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF135Q8IUD6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.4□□□□□ -1.71
RNF135Q8IUD6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF135Q8IUD6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF135Q8IUD6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 SNORA18.2-201ENST00000383865 132 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 SNORA72.4-201ENST00000384174 132 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 RNA5SP89-201ENST00000410300 108 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 HMGN2P20-201ENST00000437531 273 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 RPS3P1-201ENST00000456781 192 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 RNU7-23P-201ENST00000459465 62 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 AC010469.1-201ENST00000463864 576 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 AC092991.1-201ENST00000477176 376 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 AC006111.3-201ENST00000622137 383 ntBASIC4.39□□□□□ -1.71
RNF135Q8IUD6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF135Q8IUD6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 Y_RNA.243-201ENST00000364481 109 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 RNA5SP38-201ENST00000410750 119 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 Z92545.1-201ENST00000411782 234 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AC006461.1-201ENST00000412637 326 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 PPIAP15-201ENST00000479662 484 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AC090049.2-201ENST00000550377 109 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AC023043.3-201ENST00000593113 385 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AP001340.1-201ENST00000624405 217 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AF127577.6-201ENST00000623352 2191 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AC068700.1-201ENST00000565862 3754 ntBASIC4.38□□□□□ -1.71
RNF135Q8IUD6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF135Q8IUD6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RNU4-10P-201ENST00000364383 140 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 Y_RNA.293-201ENST00000364908 93 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 U1.1-201ENST00000384101 164 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 SNORA8.3-201ENST00000384679 139 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 U8.12-201ENST00000384701 133 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 MIR626-201ENST00000385032 94 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 SNORD66.1-201ENST00000391230 76 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RNU5E-3P-201ENST00000515913 68 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RNU2-44P-201ENST00000516795 194 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RNU2-56P-201ENST00000516826 190 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 Y_RNA.712-201ENST00000517011 92 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 AP001328.1-201ENST00000528550 176 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 AC025281.1-201ENST00000567026 265 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RPL23AP97-201ENST00000568955 471 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 U7.2-201ENST00000607576 63 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 AC134026.1-201ENST00000623249 2239 ntBASIC4.37□□□□□ -1.71
RNF135Q8IUD6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF135Q8IUD6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 MIR448-201ENST00000362131 111 ntBASIC4.36□□□□□ -1.71
RNF135Q8IUD6 RNU6-655P-201ENST00000362858 107 ntBASIC4.36□□□□□ -1.71
RNF135Q8IUD6 RNU6-1210P-201ENST00000363775 107 ntBASIC4.36□□□□□ -1.71
RNF135Q8IUD6 RNU6-750P-201ENST00000390946 107 ntBASIC4.36□□□□□ -1.71
RNF135Q8IUD6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF135Q8IUD6 RNU6-168P-201ENST00000516189 101 ntBASIC4.36□□□□□ -1.71
RNF135Q8IUD6 MTND5P34-201ENST00000568888 325 ntBASIC4.36□□□□□ -1.71
RNF135Q8IUD6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms