Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-137P-201ENST00000363680 108 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 RNU4-56P-201ENST00000364700 142 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 SNORA20.1-201ENST00000364790 130 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 U8.10-201ENST00000384260 133 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 Y_RNA.539-201ENST00000384635 107 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 RNA5SP354-201ENST00000391247 136 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 SNORA48.8-201ENST00000391324 134 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 RNU2-14P-201ENST00000411053 191 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 AC012306.1-201ENST00000423267 114 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 AL049830.2-201ENST00000480072 201 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 MIR3136-201ENST00000583498 78 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 AC010900.2-201ENST00000604508 210 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 MIR7153-201ENST00000637758 57 ntBASIC3.97□□□□□ -1.77
USP48Q86UV5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.97□□□□□ -1.77
USP48Q86UV5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP48Q86UV5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.96□□□□□ -1.78
USP48Q86UV5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.96□□□□□ -1.78
USP48Q86UV5 AC110774.1-201ENST00000623567 2018 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 RNA5SP432-201ENST00000362480 116 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 Y_RNA.84-201ENST00000363011 104 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 AP001324.2-201ENST00000461163 319 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 RN7SL863P-201ENST00000462370 296 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 TRBVB-201ENST00000477100 408 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 AC090525.1-201ENST00000479116 478 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 AIG1P1-201ENST00000503376 148 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 AC067942.3-201ENST00000512025 362 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 SNORA31.16-201ENST00000516773 139 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 Y_RNA.713-201ENST00000517013 96 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 AC027288.2-201ENST00000553028 243 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.96□□□□□ -1.78
USP48Q86UV5 AC104984.5-201ENST00000586878 94 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 AC073657.2-201ENST00000605661 303 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 uc_338.14-201ENST00000613162 166 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 SNORD98-201ENST00000636377 67 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 U6.92-201ENST00000636464 89 ntBASIC3.96□□□□□ -1.78
USP48Q86UV5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USP48Q86UV5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USP48Q86UV5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.96□□□□□ -1.78
USP48Q86UV5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP48Q86UV5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.95□□□□□ -1.78
USP48Q86UV5 RNU6-1301P-201ENST00000362724 104 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 snoU2_19.2-201ENST00000363024 80 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 RNU6-209P-201ENST00000384118 107 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 RNU6-1203P-201ENST00000410703 110 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 RPS26P42-201ENST00000413485 326 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 EIF1P2-201ENST00000428233 350 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 snoU13.6-201ENST00000458785 104 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 SNORA64.4-201ENST00000516632 81 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 AC107934.2-201ENST00000518653 310 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 AC013412.1-201ENST00000610687 192 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 AC018692.3-201ENST00000623929 123 ntBASIC3.95□□□□□ -1.78
USP48Q86UV5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP48Q86UV5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USP48Q86UV5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP48Q86UV5 Y_RNA.20-201ENST00000362479 113 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 SNORD78.2-201ENST00000391076 69 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 RNA5SP293-201ENST00000410527 113 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 RNU2-25P-201ENST00000411041 191 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 AC126124.2-201ENST00000413542 321 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.94□□□□□ -1.78
USP48Q86UV5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.94□□□□□ -1.78
USP48Q86UV5 AL358075.3-201ENST00000426289 226 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 RPS15AP7-201ENST00000439294 405 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.94□□□□□ -1.78
USP48Q86UV5 RPS27P26-201ENST00000494583 239 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.94□□□□□ -1.78
USP48Q86UV5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.94□□□□□ -1.78
USP48Q86UV5 AC136932.1-201ENST00000574771 208 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 MIR3945-201ENST00000581853 98 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 AC073410.2-201ENST00000603240 332 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 AL078605.1-201ENST00000603529 500 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 MIR6715A-201ENST00000615929 79 ntBASIC3.94□□□□□ -1.78
USP48Q86UV5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP48Q86UV5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.94□□□□□ -1.78
USP48Q86UV5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.94□□□□□ -1.78
USP48Q86UV5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.93□□□□□ -1.78
USP48Q86UV5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
USP48Q86UV5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP48Q86UV5 SNORD56.3-201ENST00000363507 71 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 SNORD115-8-201ENST00000363856 82 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 RNU6-879P-201ENST00000364328 108 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 RNA5SP139-201ENST00000364340 117 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 SNORD115-38-201ENST00000365037 82 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 RNU6-805P-201ENST00000365643 106 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 AP000705.1-201ENST00000454567 350 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 snoU13.14-201ENST00000459372 104 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 AC008885.1-201ENST00000514930 301 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 RNU6-138P-201ENST00000515952 107 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 RNU6-58P-201ENST00000517143 103 ntBASIC3.93□□□□□ -1.78
USP48Q86UV5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.93□□□□□ -1.78
USP48Q86UV5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP48Q86UV5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP48Q86UV5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP48Q86UV5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP48Q86UV5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP48Q86UV5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
USP48Q86UV5 Y_RNA.439-201ENST00000384119 94 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 SNORD115-46-201ENST00000390982 71 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 RNU1-101P-201ENST00000391171 127 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms