Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 MIR6766-201ENST00000622641 72 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 AL160413.1-201ENST00000622780 310 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.03□□□□□ -1.93
KRT28Q7Z3Y7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-212P-201ENST00000362642 104 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.146-201ENST00000363549 102 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 U3.13-201ENST00000364804 214 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-43P-201ENST00000384302 107 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-174P-201ENST00000410406 106 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AL031659.1-201ENST00000447075 539 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 SNORA25.11-201ENST00000515935 105 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-1170P-201ENST00000515974 106 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 HSPE1P4-201ENST00000550617 308 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC005899.2-201ENST00000584353 90 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 RPL23AP78-201ENST00000599928 470 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AL356157.2-201ENST00000605122 111 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC080078.3-201ENST00000605407 463 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AL109809.4-201ENST00000603520 2185 ntBASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.02□□□□□ -1.93
KRT28Q7Z3Y7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 AL359854.1-201ENST00000614203 1594 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 RNU1-17P-201ENST00000363022 152 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.579-201ENST00000390939 94 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 AL591034.2-201ENST00000402839 359 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 RPL19P1-201ENST00000411635 428 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 MTCO3P10-201ENST00000455912 772 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 SEM1P1-201ENST00000506694 209 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 SNORA31.6-201ENST00000516241 130 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 MIR4781-201ENST00000585250 76 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 AC044792.1-201ENST00000593294 196 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 AL356055.1-201ENST00000602528 446 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 HMGB1P24-202ENST00000615653 685 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
KRT28Q7Z3Y7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3□□□□□ -1.93
KRT28Q7Z3Y7 MTND5P9-201ENST00000503854 1755 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 MTND5P30-201ENST00000452896 1731 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.48-201ENST00000362710 103 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.187-201ENST00000363918 113 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-1141P-201ENST00000364520 107 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 MTND1P14-201ENST00000427400 950 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 AL445646.1-201ENST00000431784 216 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3□□□□□ -1.93
KRT28Q7Z3Y7 AC104564.1-201ENST00000493028 407 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 AC093303.1-201ENST00000514549 295 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 SCARNA16.2-201ENST00000516520 172 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 RNA5SP384-201ENST00000516615 116 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-264P-201ENST00000517134 104 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3□□□□□ -1.93
KRT28Q7Z3Y7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3□□□□□ -1.93
KRT28Q7Z3Y7 MTND5P10-201ENST00000603719 1809 ntBASIC3□□□□□ -1.93
KRT28Q7Z3Y7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 Z75746.1-201ENST00000440243 2080 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 SNORD42.2-201ENST00000365570 69 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-142P-201ENST00000384019 107 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 RNU6-890P-201ENST00000384121 107 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 RNU2-2P-201ENST00000410396 191 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 RNU2-23P-201ENST00000410545 195 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 AC097463.2-201ENST00000421074 142 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 EIF4EP2-201ENST00000422816 654 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 AC244670.1-201ENST00000436879 112 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 AC245517.4-201ENST00000448601 281 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 AC027575.1-201ENST00000481064 460 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 AC005741.1-201ENST00000511094 432 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 RNA5SP200-201ENST00000516360 103 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 MIR4498-201ENST00000577599 66 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 U2.15-201ENST00000611544 191 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 U2.16-201ENST00000613119 191 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 MIR6845-201ENST00000613182 61 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 U2.12-201ENST00000613778 191 ntBASIC2.99□□□□□ -1.93
KRT28Q7Z3Y7 U2.20-201ENST00000613956 192 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms