Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU4-56P-201ENST00000364700 142 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 RNY3P4-201ENST00000384428 101 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 U3.19-201ENST00000390893 196 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 U3.26-201ENST00000391236 204 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 RNU1-139P-201ENST00000391307 165 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 RPL21P1-201ENST00000399532 476 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 MIR1302-3-201ENST00000408128 138 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 WARS2P1-201ENST00000429678 537 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 RPEP5-201ENST00000441137 268 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 AC073910.1-201ENST00000445047 438 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 SNORA67.7-201ENST00000516664 135 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-58P-201ENST00000517143 103 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 CYP4A27P-201ENST00000567218 190 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 AL138963.2-201ENST00000605137 226 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 AC006133.1-201ENST00000617106 264 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 U6.92-201ENST00000636464 89 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 AL359854.1-201ENST00000614203 1594 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 AC135776.4-201ENST00000624300 1904 ntBASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-655P-201ENST00000362858 107 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 Y_RNA.214-201ENST00000364201 112 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-879P-201ENST00000364328 108 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 SNORD15B-201ENST00000384714 146 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 MIR183-201ENST00000384958 110 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 MIR10B-201ENST00000385011 110 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 RNA5SP213-201ENST00000391031 106 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 MIR208B-201ENST00000401172 77 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 RPS26P42-201ENST00000413485 326 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 AC097463.2-201ENST00000421074 142 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 IPO7P1-201ENST00000442031 636 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 DYNLT3P2-201ENST00000442517 295 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 FCF1P4-201ENST00000448326 183 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 AC091153.1-201ENST00000466297 402 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 AL121594.1-201ENST00000475906 575 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 MIR5695-201ENST00000579717 85 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 MIR3149-201ENST00000584629 83 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 MIR4765-201ENST00000585007 77 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 AC005296.1-201ENST00000616145 209 ntBASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PTCHD4Q6ZW05 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-1210P-201ENST00000363775 107 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SNORD115-8-201ENST00000363856 82 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SNORD115-38-201ENST00000365037 82 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 Y_RNA.458-201ENST00000384240 102 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 MIR549A-201ENST00000385268 96 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SNORD67-201ENST00000390833 111 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-159P-201ENST00000391080 106 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-1093P-201ENST00000391194 107 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-130P-201ENST00000411112 103 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AL451074.5-201ENST00000415894 435 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 ELOCP20-201ENST00000422460 345 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AC096638.1-201ENST00000444678 216 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SNORA84-201ENST00000459229 133 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RN7SL863P-201ENST00000462370 296 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU2-53P-201ENST00000516257 147 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-1198P-201ENST00000516904 67 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-897P-201ENST00000517135 105 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 MIR3923-201ENST00000579521 83 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AC125232.2-201ENST00000592457 143 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AL121655.1-201ENST00000605811 308 ntBASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD4Q6ZW05 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 AC073325.2-201ENST00000339545 159 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 Y_RNA.26-201ENST00000362539 101 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 RNA5SP361-201ENST00000362686 118 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-137P-201ENST00000363680 108 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-461P-201ENST00000364195 107 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 SNORA68.1-201ENST00000364537 132 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 Y_RNA.276-201ENST00000364732 109 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-1083P-201ENST00000384022 107 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 Y_RNA.452-201ENST00000384202 108 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 SNORA7.4-201ENST00000384249 137 ntBASIC2.74□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-318P-201ENST00000384283 103 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms