Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
NCBP3Q53F19 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.72□□□□□ -1.33
NCBP3Q53F19 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NCBP3Q53F19 SNORA2.3-201ENST00000383920 135 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 MIR889-201ENST00000401280 79 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 AP000567.1-201ENST00000406413 156 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 HMGN2P31-201ENST00000432430 273 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 RPS17P2-201ENST00000461663 408 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 MIR4778-201ENST00000577635 80 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 MIR4668-201ENST00000582284 70 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.72□□□□□ -1.33
NCBP3Q53F19 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NCBP3Q53F19 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC6.72□□□□□ -1.33
NCBP3Q53F19 AC015813.6-201ENST00000624409 5808 ntBASIC6.72□□□□□ -1.33
NCBP3Q53F19 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NCBP3Q53F19 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.71□□□□□ -1.33
NCBP3Q53F19 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC6.71□□□□□ -1.33
NCBP3Q53F19 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NCBP3Q53F19 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NCBP3Q53F19 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NCBP3Q53F19 RNU4-67P-201ENST00000364569 141 ntBASIC6.71□□□□□ -1.34
NCBP3Q53F19 SNORA14A-201ENST00000364773 135 ntBASIC6.71□□□□□ -1.34
NCBP3Q53F19 Y_RNA.440-201ENST00000384120 114 ntBASIC6.71□□□□□ -1.34
NCBP3Q53F19 Y_RNA.620-201ENST00000411009 88 ntBASIC6.71□□□□□ -1.34
NCBP3Q53F19 AC006349.1-201ENST00000555526 235 ntBASIC6.71□□□□□ -1.34
NCBP3Q53F19 YPEL5P2-201ENST00000605553 359 ntBASIC6.71□□□□□ -1.34
NCBP3Q53F19 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NCBP3Q53F19 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.71□□□□□ -1.34
NCBP3Q53F19 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
NCBP3Q53F19 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NCBP3Q53F19 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NCBP3Q53F19 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NCBP3Q53F19 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.71□□□□□ -1.34
NCBP3Q53F19 AL049781.1-201ENST00000623195 3585 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC6.7□□□□□ -1.34
NCBP3Q53F19 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NCBP3Q53F19 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NCBP3Q53F19 RNU6-661P-201ENST00000362409 107 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 SNORD45B-201ENST00000364617 72 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 Y_RNA.267-201ENST00000364679 109 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 SNORD6-201ENST00000365444 73 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 RNA5SP187-201ENST00000384400 119 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 MIR105-2-201ENST00000385083 81 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 Y_RNA.611-201ENST00000410682 108 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 RPL23AP46-201ENST00000438548 490 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 COX6B1P2-201ENST00000489624 230 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 Y_RNA.705-201ENST00000516862 110 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 SNORA18.7-201ENST00000516910 131 ntBASIC6.7□□□□□ -1.34
NCBP3Q53F19 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.7□□□□□ -1.34
NCBP3Q53F19 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NCBP3Q53F19 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NCBP3Q53F19 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NCBP3Q53F19 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.7□□□□□ -1.34
NCBP3Q53F19 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.7□□□□□ -1.34
NCBP3Q53F19 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NCBP3Q53F19 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NCBP3Q53F19 MAPK10-372ENST00000641954 3413 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
NCBP3Q53F19 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC6.69□□□□□ -1.34
NCBP3Q53F19 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.69□□□□□ -1.34
NCBP3Q53F19 MIR937-201ENST00000401271 86 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 RPS15AP28-201ENST00000435088 386 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 AL450023.3-201ENST00000440592 271 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.69□□□□□ -1.34
NCBP3Q53F19 HMGN2P18-201ENST00000450680 270 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 RN7SL443P-201ENST00000464331 290 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.69□□□□□ -1.34
NCBP3Q53F19 AC103810.1-201ENST00000579873 453 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 AC064859.1-201ENST00000624741 174 ntBASIC6.69□□□□□ -1.34
NCBP3Q53F19 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
NCBP3Q53F19 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NCBP3Q53F19 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 SNORA70-201ENST00000384436 135 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 RNY1P4-201ENST00000384595 115 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 AC099677.2-201ENST00000436385 175 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 HMGN2P34-201ENST00000437647 269 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 RNU7-80P-201ENST00000459562 61 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 RPL32P34-201ENST00000486380 400 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 MIR6730-201ENST00000622213 67 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 AC012442.3-202ENST00000636742 206 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 Clostridiales-1.3-201ENST00000637703 147 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC6.68□□□□□ -1.34
NCBP3Q53F19 AC017071.1-201ENST00000564407 2204 ntBASIC6.68□□□□□ -1.34
NCBP3Q53F19 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NCBP3Q53F19 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NCBP3Q53F19 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NCBP3Q53F19 U8.4-201ENST00000363626 134 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 Y_RNA.547-201ENST00000384654 119 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 RNU6-887P-201ENST00000410660 100 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.67□□□□□ -1.34
NCBP3Q53F19 AL445646.1-201ENST00000431784 216 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 FTH1P12-201ENST00000432137 551 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 BX323845.1-201ENST00000432417 179 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 AL162151.2-201ENST00000448875 158 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms