Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MTND1P15-201ENST00000579262 949 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 MIR4290-201ENST00000583807 95 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AC012507.3-201ENST00000603556 477 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 MIR15A-201ENST00000607334 83 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AL136317.1-201ENST00000612653 226 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AL354696.1-201ENST00000614652 497 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 SNORD98-201ENST00000636377 67 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 HMGB1P29-201ENST00000505659 499 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 MTND1P22-201ENST00000510572 951 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 SNORA31.10-201ENST00000516482 106 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 MTND4LP26-201ENST00000518144 282 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AC131055.1-201ENST00000584626 316 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AL606834.3-201ENST00000602615 496 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AC104073.3-201ENST00000610942 955 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AC136475.10-201ENST00000620253 385 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 AC099654.8-201ENST00000637757 681 ntBASIC-0.24□□□□□ -2.45
CCDC58Q4VC31 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 RNU6-792P-201ENST00000363490 107 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 RNU6-289P-201ENST00000364093 107 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 RNU6-278P-201ENST00000390945 109 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AL133217.1-201ENST00000450980 425 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AC004987.4-201ENST00000603383 338 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AL031775.1-201ENST00000607014 887 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 AC024940.5-201ENST00000622889 474 ntBASIC-0.25□□□□□ -2.45
CCDC58Q4VC31 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 MIR544A-201ENST00000384855 91 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 RN7SKP200-201ENST00000410564 320 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 MTCYBP10-201ENST00000424905 650 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC104332.1-201ENST00000440471 797 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC093899.1-201ENST00000457984 376 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC119751.4-201ENST00000507498 357 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC113347.3-201ENST00000509113 148 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 RNA5SP227-201ENST00000516184 113 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 DEFB131D-201ENST00000526803 184 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 AC109810.1-201ENST00000534066 224 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 MIR3146-201ENST00000580367 79 ntBASIC-0.26□□□□□ -2.45
CCDC58Q4VC31 BX322639.1-202ENST00000423987 2213 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 SMIM11P1-201ENST00000369586 178 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 MIR660-201ENST00000385235 97 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 RPS20P2-201ENST00000402520 389 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AL163973.1-201ENST00000484753 577 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 MTCO3P9-201ENST00000506989 781 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AC112206.3-201ENST00000514578 389 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AC024995.1-201ENST00000523014 93 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 AL391903.3-201ENST00000612158 163 ntBASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC58Q4VC31 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 RNY1P14-201ENST00000384426 108 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 RNU6-700P-201ENST00000391043 107 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 RNA5SP323-201ENST00000391094 133 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AC092809.3-201ENST00000415453 231 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AL162725.1-201ENST00000435405 301 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AC092989.1-201ENST00000481235 277 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AC069113.3-201ENST00000521019 150 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AP002001.1-203ENST00000534002 267 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AC022523.2-201ENST00000561045 150 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 AC090517.2-201ENST00000614966 680 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 RMST_2.1-201ENST00000617263 136 ntBASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.28□□□□□ -2.45
CCDC58Q4VC31 RNU6-222P-201ENST00000362438 107 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 RNU6-199P-201ENST00000362954 107 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 RNA5SP214-201ENST00000363378 118 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 AL603865.2-201ENST00000401679 213 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 RNA5SP201-201ENST00000410316 124 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 AC067940.1-201ENST00000458411 300 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 AC023827.1-201ENST00000569247 97 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 MIR5190-201ENST00000581537 80 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms