Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC136475.10-201ENST00000620253 385 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC010615.1-201ENST00000594254 1764 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
ZNF404Q494X3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF404Q494X3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU6-827P-201ENST00000365553 106 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU6-378P-201ENST00000384324 107 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 MIR548B-201ENST00000385247 97 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF404Q494X3 RPS27P16-201ENST00000425758 201 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC245047.4-201ENST00000433189 144 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AL133217.1-201ENST00000450980 425 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU7-125P-201ENST00000458760 62 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC007547.1-201ENST00000462177 490 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC079140.2-201ENST00000506193 142 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC079140.5-201ENST00000507882 310 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC079140.3-201ENST00000511111 550 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.02□□□□□ -2.25
ZNF404Q494X3 RN7SKP265-201ENST00000516448 223 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU6-567P-201ENST00000516746 107 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU6-232P-201ENST00000517144 64 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 SNORA25.17-201ENST00000517184 124 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC019176.1-201ENST00000518519 225 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF404Q494X3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF404Q494X3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC021231.3-201ENST00000558497 370 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 CYP4A27P-201ENST00000567218 190 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AP005136.1-201ENST00000579765 429 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RSL24D1P11-201ENST00000591045 491 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC002044.1-201ENST00000606707 158 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AF246928.1-201ENST00000623768 87 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 AC079248.2-201ENST00000623779 326 ntBASIC1.02□□□□□ -2.25
ZNF404Q494X3 RNU6-862P-201ENST00000362804 105 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RNY1P10-201ENST00000363268 113 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RNU6-553P-201ENST00000364047 96 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RNU4-91P-201ENST00000364778 135 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RNU4-48P-201ENST00000365559 182 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 SNORA16.2-201ENST00000390991 127 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 ARL5AP1-201ENST00000418991 388 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC027119.1-201ENST00000440877 241 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC007395.1-201ENST00000451333 677 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AL033528.1-201ENST00000453780 140 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC010531.2-201ENST00000465012 153 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC108078.1-201ENST00000508073 725 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC091874.1-201ENST00000511402 339 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RNA5SP481-201ENST00000516814 122 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RRN3P3-201ENST00000549207 578 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC109446.2-201ENST00000567872 497 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC090517.1-201ENST00000569307 266 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC005668.1-201ENST00000571142 476 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF404Q494X3 RPL17P51-201ENST00000605218 238 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AL050303.3-201ENST00000613704 284 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF404Q494X3 AC095038.3-201ENST00000634439 195 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 AL450472.1-202ENST00000637286 180 ntBASIC1.01□□□□□ -2.25
ZNF404Q494X3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF404Q494X3 SNORD33-201ENST00000362761 85 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 RNU1-76P-201ENST00000362903 159 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 RNU6-266P-201ENST00000364225 107 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 RNU6-1019P-201ENST00000364424 107 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 SNORA36A-201ENST00000384221 132 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 RNU6-1127P-201ENST00000384580 107 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 MIR208B-201ENST00000401172 77 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
ZNF404Q494X3 AL163973.1-201ENST00000484753 577 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1□□□□□ -2.25
ZNF404Q494X3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1□□□□□ -2.25
ZNF404Q494X3 AC008015.1-201ENST00000555505 465 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AC012414.6-201ENST00000568241 401 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 SNORA59B-202ENST00000578183 701 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 MIR3908-201ENST00000579798 126 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 MIR3937-201ENST00000580135 106 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AC245014.2-201ENST00000603689 287 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AP001836.1-201ENST00000604675 523 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AC246785.4-201ENST00000605374 287 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 MIR3976-201ENST00000606807 139 ntBASIC1□□□□□ -2.25
ZNF404Q494X3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1□□□□□ -2.25
ZNF404Q494X3 RNU1-96P-201ENST00000364163 162 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 SNORA63D-201ENST00000364359 132 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 MRPL35P1-201ENST00000404272 572 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 AP000275.1-201ENST00000411943 390 ntBASIC0.99□□□□□ -2.25
ZNF404Q494X3 MTCO1P21-201ENST00000416634 589 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms