Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC007792.1-201ENST00000623023 402 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC124864.2-201ENST00000624736 186 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC090517.3-201ENST00000625170 141 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 OR5AK4P-201ENST00000635912 903 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 SNORD115-3-201ENST00000363100 82 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RNU6-336P-201ENST00000364891 107 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RNU6-692P-201ENST00000384496 107 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RNU6-1274P-201ENST00000384557 107 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 CALM2P3-201ENST00000400429 449 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 CBX3P9-201ENST00000402326 552 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL606923.1-201ENST00000406616 190 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RNU2-48P-201ENST00000410694 191 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL513185.2-201ENST00000425543 193 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL354695.1-201ENST00000427935 228 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AC013470.1-201ENST00000453438 462 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RNU6-261P-201ENST00000459506 102 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 SRRM1P2-201ENST00000464531 1192 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 MTCO3P38-201ENST00000468910 766 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RPL30P1-201ENST00000488676 339 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 SNORA40.12-201ENST00000516329 111 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 MTND4P7-201ENST00000523876 130 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AC103996.1-201ENST00000555468 102 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 MIR4781-201ENST00000585250 76 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL136363.2-201ENST00000604173 851 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 ELOCP5-201ENST00000604924 333 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 RNU6-85P-201ENST00000605989 107 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AP001330.5-201ENST00000607176 411 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AC063943.3-201ENST00000615562 356 ntBASIC1.15□□□□□ -2.23
TNFRSF9Q07011 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFRSF9Q07011 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.41-201ENST00000362646 102 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-1285P-201ENST00000363480 105 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-1210P-201ENST00000363775 107 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-944P-201ENST00000364023 107 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-60P-201ENST00000364792 103 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-827P-201ENST00000365553 106 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 SNORA69-201ENST00000383895 132 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-38P-201ENST00000384085 107 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.559-201ENST00000384686 107 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNA5SP219-201ENST00000390940 113 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 SNORA67.6-201ENST00000391093 99 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU11-3P-201ENST00000391111 133 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 MTCO3P40-201ENST00000392516 676 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU2-16P-201ENST00000410712 136 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AL117339.3-201ENST00000418733 162 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 Z82205.1-201ENST00000428456 297 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AL031274.1-201ENST00000450334 232 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU6-333P-201ENST00000459117 107 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 SNRPGP7-201ENST00000469016 106 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AC107401.1-201ENST00000503426 685 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AC009646.1-201ENST00000510455 318 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNA5SP401-201ENST00000515920 127 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 RNU5F-2P-201ENST00000516066 82 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 SNORA31.24-201ENST00000517232 57 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AP001893.2-201ENST00000526949 202 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AP003034.1-201ENST00000534621 422 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AC090115.3-201ENST00000553218 849 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AL118558.2-201ENST00000556294 238 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.14□□□□□ -2.23
TNFRSF9Q07011 AC107304.1-201ENST00000604229 296 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 Z82243.1-201ENST00000609432 473 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 U2.17-201ENST00000611454 95 ntBASIC1.14□□□□□ -2.23
TNFRSF9Q07011 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
TNFRSF9Q07011 U8.1-201ENST00000362843 134 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU4-24P-201ENST00000364565 139 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.378-201ENST00000365652 113 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.436-201ENST00000384097 102 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU6-1222P-201ENST00000384615 107 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU6-780P-201ENST00000391030 104 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RPS29P13-201ENST00000402041 169 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU6-174P-201ENST00000410406 106 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU2-41P-201ENST00000410991 178 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNA5SP247-201ENST00000411181 105 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU2-32P-201ENST00000411193 191 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 SNRPGP13-201ENST00000442212 177 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC009474.2-201ENST00000451383 136 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms