Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 SEPT14P8-201ENST00000508026 178 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 RN7SKP49-201ENST00000516675 260 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 RNU6-58P-201ENST00000517143 103 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 NDUFB9P3-201ENST00000521269 501 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 CBX3P4-201ENST00000538909 354 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 MIR4423-201ENST00000580922 80 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 AL356157.2-201ENST00000605122 111 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 SNORD113-5-201ENST00000607261 78 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX3-2P78367 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 RN7SL853P-201ENST00000617250 223 ntBASIC3.5□□□□□ -1.85
NKX3-2P78367 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NKX3-2P78367 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX3-2P78367 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX3-2P78367 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX3-2P78367 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
NKX3-2P78367 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX3-2P78367 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX3-2P78367 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX3-2P78367 HAUS6P2-201ENST00000433254 2404 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AC135776.4-201ENST00000624300 1904 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RNU1-35P-201ENST00000362782 153 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 SNORA5B-201ENST00000363786 132 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RNU6-961P-201ENST00000363893 105 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 SNORD15B-201ENST00000384714 146 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 MIR329-1-201ENST00000385028 80 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RNU6-651P-201ENST00000411040 105 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX3-2P78367 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX3-2P78367 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX3-2P78367 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX3-2P78367 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX3-2P78367 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX3-2P78367 RPL26P9-201ENST00000457466 433 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AC073901.1-201ENST00000462471 408 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 MED28P2-201ENST00000475771 317 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX3-2P78367 AC107393.1-201ENST00000512403 346 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RNA5SP356-201ENST00000515972 94 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RNU6-406P-201ENST00000516470 107 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RNU6-567P-201ENST00000516746 107 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AC016256.1-201ENST00000547971 354 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX3-2P78367 MIR4474-201ENST00000579189 78 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX3-2P78367 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX3-2P78367 U2.22-201ENST00000636441 106 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX3-2P78367 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.49□□□□□ -1.85
NKX3-2P78367 AC000403.1-201ENST00000613696 3585 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX3-2P78367 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX3-2P78367 AL672296.1-201ENST00000427780 2158 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX3-2P78367 MIR411-201ENST00000362239 96 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 RNU6-626P-201ENST00000363354 107 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 RNU6-1141P-201ENST00000364520 107 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 RNU6-740P-201ENST00000364734 105 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 RNU6-20P-201ENST00000384106 107 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 BPY2DP-201ENST00000422208 265 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX3-2P78367 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX3-2P78367 HMGN2P10-201ENST00000448085 265 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AC016632.1-201ENST00000503994 196 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 MIR2276-201ENST00000516886 89 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 RNU7-110P-201ENST00000516891 62 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 RNU2-31P-201ENST00000516954 155 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AC024405.2-202ENST00000532731 184 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AL391261.3-201ENST00000557194 520 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AC021739.1-201ENST00000559631 174 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AC009163.5-201ENST00000575421 637 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 AL136164.4-201ENST00000625013 2135 ntBASIC3.48□□□□□ -1.85
NKX3-2P78367 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX3-2P78367 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX3-2P78367 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX3-2P78367 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX3-2P78367 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX3-2P78367 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX3-2P78367 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NKX3-2P78367 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NKX3-2P78367 RNU6-326P-201ENST00000365480 107 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 RNU6-1145P-201ENST00000384246 107 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 Y_RNA.569-201ENST00000384749 103 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 SNORA53-201ENST00000391141 249 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 RNU5A-5P-201ENST00000411054 116 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 RPL30P12-201ENST00000474666 353 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 RPS29P26-201ENST00000477483 171 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 SNORD116-28-201ENST00000516123 91 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 AK6P2-201ENST00000549020 471 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX3-2P78367 AL359198.2-201ENST00000611836 194 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 AL357075.2-201ENST00000614906 189 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX3-2P78367 AC090740.1-201ENST00000623193 2262 ntBASIC3.47□□□□□ -1.85
NKX3-2P78367 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX3-2P78367 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX3-2P78367 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX3-2P78367 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms