Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC022784.5-201ENST00000522241 437 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPS28P62857 MIR4714-201ENST00000580728 77 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL158827.2-201ENST00000602494 330 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AC146944.4-201ENST00000602697 718 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL596327.1-201ENST00000603629 213 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 BNIP3P19-201ENST00000605397 577 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL691447.3-201ENST00000635020 330 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 U4.7-201ENST00000638126 106 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 AL442644.1-201ENST00000454390 3105 ntBASIC-0.04□□□□□ -2.42
RPS28P62857 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
RPS28P62857 RNU6-621P-201ENST00000364752 109 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 RNU6-224P-201ENST00000384055 107 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 RNU6-378P-201ENST00000384324 107 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 RNU6-45P-201ENST00000384471 107 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 SNORA40.2-201ENST00000390847 128 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC019070.1-201ENST00000415008 1024 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC006366.1-201ENST00000422002 759 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 USP9YP11-201ENST00000427537 717 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 RPS25P9-201ENST00000435591 252 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC244505.5-201ENST00000443639 207 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AL360271.2-201ENST00000447710 161 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC007547.1-201ENST00000462177 490 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.05□□□□□ -2.42
RPS28P62857 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.05□□□□□ -2.42
RPS28P62857 AP002001.1-203ENST00000534002 267 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 MTND1P15-201ENST00000579262 949 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC234772.3-201ENST00000602277 528 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC025811.1-201ENST00000604312 472 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC016727.1-205ENST00000605437 569 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC091965.4-201ENST00000607691 587 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 MIR8054-201ENST00000620877 86 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AC006001.4-201ENST00000622243 395 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 AP002782.1-201ENST00000623107 614 ntBASIC-0.05□□□□□ -2.42
RPS28P62857 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 RNA5SP62-201ENST00000363457 110 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
RPS28P62857 RNA5SP219-201ENST00000390940 113 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 MIR1283-1-201ENST00000408494 87 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 RNU6-293P-201ENST00000411259 106 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 MTCO2P34-201ENST00000421994 607 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 AC245047.3-201ENST00000429428 127 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 RPL31P35-201ENST00000431058 377 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 snoU13.26-201ENST00000459452 105 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC-0.06□□□□□ -2.42
RPS28P62857 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.06□□□□□ -2.42
RPS28P62857 HMGN1P7-201ENST00000491722 313 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.06□□□□□ -2.42
RPS28P62857 AC025465.4-201ENST00000513422 638 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 AC011604.1-201ENST00000545978 196 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.06□□□□□ -2.42
RPS28P62857 AC131055.1-201ENST00000584626 316 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 BNIP3P26-201ENST00000600827 554 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 AC131235.4-201ENST00000609288 620 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 AC012409.4-201ENST00000612923 249 ntBASIC-0.06□□□□□ -2.42
RPS28P62857 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
RPS28P62857 RNA5SP264-201ENST00000363115 107 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 RNU6-16P-201ENST00000384385 107 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 RNA5SP467-201ENST00000391274 118 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 MTND4P3-201ENST00000417829 541 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPS28P62857 HSFY7P-201ENST00000432672 318 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 HSFY8P-201ENST00000437934 318 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 OR9P1P-201ENST00000496431 281 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPS28P62857 RBBP4P6-201ENST00000508098 202 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 AC119751.5-201ENST00000514077 770 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 RNU6-496P-201ENST00000516145 99 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 RNU6-751P-201ENST00000516382 101 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 RNU1-142P-201ENST00000516682 145 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 AC026616.1-201ENST00000523157 525 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 AC109810.1-201ENST00000534066 224 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC-0.07□□□□□ -2.42
RPS28P62857 AC078795.3-201ENST00000602913 472 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 AL031775.1-201ENST00000607014 887 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 Z69720.2-201ENST00000624755 279 ntBASIC-0.07□□□□□ -2.42
RPS28P62857 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
RPS28P62857 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
RPS28P62857 MIR103A1-201ENST00000362165 78 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 RNU6-692P-201ENST00000384496 107 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 RNA5SP213-201ENST00000391031 106 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 MIR208B-201ENST00000401172 77 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 AC104332.1-201ENST00000440471 797 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC-0.08□□□□□ -2.42
RPS28P62857 LINC01399-202ENST00000458450 244 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 AC098799.1-201ENST00000504752 800 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 RNU6-123P-201ENST00000516163 102 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 RNU6-917P-201ENST00000516294 104 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 RNU6-948P-201ENST00000516374 107 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 RNU6-567P-201ENST00000516746 107 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.08□□□□□ -2.42
RPS28P62857 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.08□□□□□ -2.42
RPS28P62857 AC009712.1-201ENST00000564938 316 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 MIR5692A1-201ENST00000580523 69 ntBASIC-0.08□□□□□ -2.42
RPS28P62857 Z99497.2-201ENST00000603634 310 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms