Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC022217.4-201ENST00000604389 163 ntBASIC0.08□□□□□ -2.4
LSM3P62310 PRELID3BP2-201ENST00000605362 201 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AC091965.4-201ENST00000607691 587 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.08□□□□□ -2.4
LSM3P62310 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.08□□□□□ -2.4
LSM3P62310 AL359547.2-201ENST00000615810 418 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AL359740.1-201ENST00000624340 592 ntBASIC0.08□□□□□ -2.4
LSM3P62310 OR4G1P-203ENST00000641984 1631 ntBASIC0.08□□□□□ -2.4
LSM3P62310 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
LSM3P62310 RNU6-224P-201ENST00000384055 107 ntBASIC0.07□□□□□ -2.4
LSM3P62310 EEF1A1P40-201ENST00000412883 573 ntBASIC0.07□□□□□ -2.4
LSM3P62310 USP9YP21-201ENST00000420603 432 ntBASIC0.07□□□□□ -2.4
LSM3P62310 RPL17P35-201ENST00000432217 549 ntBASIC0.07□□□□□ -2.4
LSM3P62310 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.07□□□□□ -2.4
LSM3P62310 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.07□□□□□ -2.4
LSM3P62310 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
LSM3P62310 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.07□□□□□ -2.4
LSM3P62310 RNU6-917P-201ENST00000516294 104 ntBASIC0.07□□□□□ -2.4
LSM3P62310 RNU6-1028P-201ENST00000517164 93 ntBASIC0.07□□□□□ -2.4
LSM3P62310 AC026616.1-201ENST00000523157 525 ntBASIC0.07□□□□□ -2.4
LSM3P62310 DEFB131C-201ENST00000528817 165 ntBASIC0.07□□□□□ -2.4
LSM3P62310 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.07□□□□□ -2.4
LSM3P62310 AC090517.1-201ENST00000569307 266 ntBASIC0.07□□□□□ -2.4
LSM3P62310 FRG1KP-201ENST00000623592 341 ntBASIC0.07□□□□□ -2.4
LSM3P62310 U4.7-201ENST00000638126 106 ntBASIC0.07□□□□□ -2.4
LSM3P62310 RNY4P16-201ENST00000364768 94 ntBASIC0.06□□□□□ -2.4
LSM3P62310 Y_RNA.287-201ENST00000364853 94 ntBASIC0.06□□□□□ -2.4
LSM3P62310 RNU4-48P-201ENST00000365559 182 ntBASIC0.06□□□□□ -2.4
LSM3P62310 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
LSM3P62310 MIR653-201ENST00000385279 96 ntBASIC0.06□□□□□ -2.4
LSM3P62310 SNORA16.2-201ENST00000390991 127 ntBASIC0.06□□□□□ -2.4
LSM3P62310 RNU6-293P-201ENST00000411259 106 ntBASIC0.06□□□□□ -2.4
LSM3P62310 AC019070.1-201ENST00000415008 1024 ntBASIC0.06□□□□□ -2.4
LSM3P62310 AC006366.1-201ENST00000422002 759 ntBASIC0.06□□□□□ -2.4
LSM3P62310 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.06□□□□□ -2.4
LSM3P62310 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.06□□□□□ -2.4
LSM3P62310 AC005002.2-201ENST00000438228 269 ntBASIC0.06□□□□□ -2.4
LSM3P62310 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.06□□□□□ -2.4
LSM3P62310 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.06□□□□□ -2.4
LSM3P62310 EIF4A1P12-201ENST00000551910 141 ntBASIC0.06□□□□□ -2.4
LSM3P62310 MIR3923-201ENST00000579521 83 ntBASIC0.06□□□□□ -2.4
LSM3P62310 AP000484.1-201ENST00000620067 1252 ntBASIC0.06□□□□□ -2.4
LSM3P62310 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
LSM3P62310 VTRNA1-3-201ENST00000365645 89 ntBASIC0.05□□□□□ -2.4
LSM3P62310 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.05□□□□□ -2.4
LSM3P62310 Y_RNA.595-201ENST00000410403 105 ntBASIC0.05□□□□□ -2.4
LSM3P62310 MTND4P3-201ENST00000417829 541 ntBASIC0.05□□□□□ -2.4
LSM3P62310 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.05□□□□□ -2.4
LSM3P62310 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
LSM3P62310 SNRPFP3-201ENST00000457792 225 ntBASIC0.05□□□□□ -2.4
LSM3P62310 SRRM1P2-201ENST00000464531 1192 ntBASIC0.05□□□□□ -2.4
LSM3P62310 RPS29P1-201ENST00000465274 159 ntBASIC0.05□□□□□ -2.4
LSM3P62310 RPS23P5-201ENST00000495419 428 ntBASIC0.05□□□□□ -2.4
LSM3P62310 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
LSM3P62310 AC013828.2-201ENST00000532487 235 ntBASIC0.05□□□□□ -2.4
LSM3P62310 AP002001.1-203ENST00000534002 267 ntBASIC0.05□□□□□ -2.4
LSM3P62310 AC123904.2-201ENST00000548059 300 ntBASIC0.05□□□□□ -2.4
LSM3P62310 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.05□□□□□ -2.4
LSM3P62310 AC012409.4-201ENST00000612923 249 ntBASIC0.05□□□□□ -2.4
LSM3P62310 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.05□□□□□ -2.4
LSM3P62310 MIR8054-201ENST00000620877 86 ntBASIC0.05□□□□□ -2.4
LSM3P62310 MTND4P5-201ENST00000435821 1374 ntBASIC0.05□□□□□ -2.4
LSM3P62310 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
LSM3P62310 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
LSM3P62310 AC090625.1-201ENST00000357130 210 ntBASIC0.04□□□□□ -2.4
LSM3P62310 RNU6-462P-201ENST00000362659 105 ntBASIC0.04□□□□□ -2.4
LSM3P62310 RNU6-371P-201ENST00000364283 108 ntBASIC0.04□□□□□ -2.4
LSM3P62310 RNU6-1141P-201ENST00000364520 107 ntBASIC0.04□□□□□ -2.4
LSM3P62310 Y_RNA.330-201ENST00000365230 109 ntBASIC0.04□□□□□ -2.4
LSM3P62310 SNORA36A-201ENST00000384221 132 ntBASIC0.04□□□□□ -2.4
LSM3P62310 MIR660-201ENST00000385235 97 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AL034345.1-201ENST00000407768 123 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AP000275.1-201ENST00000411943 390 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC114491.1-201ENST00000416095 246 ntBASIC0.04□□□□□ -2.4
LSM3P62310 RPL22P18-201ENST00000417197 377 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC000111.3-201ENST00000433478 193 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.04□□□□□ -2.4
LSM3P62310 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.04□□□□□ -2.4
LSM3P62310 U7.7-201ENST00000459276 60 ntBASIC0.04□□□□□ -2.4
LSM3P62310 MTND3P25-201ENST00000509243 135 ntBASIC0.04□□□□□ -2.4
LSM3P62310 RNU6-496P-201ENST00000516145 99 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC007834.2-201ENST00000536310 343 ntBASIC0.04□□□□□ -2.4
LSM3P62310 TMF1P1-201ENST00000576058 373 ntBASIC0.04□□□□□ -2.4
LSM3P62310 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC131055.1-201ENST00000584626 316 ntBASIC0.04□□□□□ -2.4
LSM3P62310 BNIP3P26-201ENST00000600827 554 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AL096861.1-201ENST00000610899 123 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC006001.4-201ENST00000622243 395 ntBASIC0.04□□□□□ -2.4
LSM3P62310 U6.108-201ENST00000637764 58 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AL445523.1-201ENST00000451184 1362 ntBASIC0.04□□□□□ -2.4
LSM3P62310 AC092268.1-201ENST00000342691 405 ntBASIC0.03□□□□□ -2.4
LSM3P62310 Y_RNA.46-201ENST00000362695 102 ntBASIC0.03□□□□□ -2.4
LSM3P62310 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
LSM3P62310 RNU6-16P-201ENST00000384385 107 ntBASIC0.03□□□□□ -2.4
LSM3P62310 MIR216A-201ENST00000385063 110 ntBASIC0.03□□□□□ -2.4
LSM3P62310 RNA5SP323-201ENST00000391094 133 ntBASIC0.03□□□□□ -2.4
LSM3P62310 RNU2-62P-201ENST00000410868 191 ntBASIC0.03□□□□□ -2.4
LSM3P62310 RNU6-1245P-201ENST00000411130 106 ntBASIC0.03□□□□□ -2.4
LSM3P62310 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms