Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLDN20P56880 MTND5P10-201ENST00000603719 1809 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN20P56880 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CLDN20P56880 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CLDN20P56880 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN20P56880 snoU2_19.1-201ENST00000362361 80 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 RNU4-15P-201ENST00000362613 141 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 Y_RNA.48-201ENST00000362710 103 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 RNU6-890P-201ENST00000384121 107 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 MIR29B2-201ENST00000385055 81 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AL078595.1-201ENST00000404458 226 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 RPL23AP50-201ENST00000434149 455 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 RN7SKP210-201ENST00000459176 261 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN20P56880 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN20P56880 AF186996.7-201ENST00000492781 209 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN20P56880 RNA5SP282-201ENST00000516355 108 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN20P56880 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN20P56880 AP000889.1-201ENST00000530968 660 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AL590705.4-201ENST00000532209 134 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN20P56880 AC005014.2-201ENST00000607795 599 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AC137590.2-201ENST00000619709 240 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AC090574.1-201ENST00000623186 233 ntBASIC2.33□□□□□ -2.04
CLDN20P56880 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN20P56880 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN20P56880 AC073544.1-201ENST00000600110 1595 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN20P56880 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CLDN20P56880 Y_RNA.146-201ENST00000363549 102 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 RNA5SP68-201ENST00000363885 119 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 Y_RNA.500-201ENST00000384466 111 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 RNA5SP210-201ENST00000391034 120 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 MTCYBP2-201ENST00000407745 171 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 RPS26P42-201ENST00000413485 326 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN20P56880 AL590556.1-201ENST00000423231 483 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN20P56880 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN20P56880 CYP2C59P-201ENST00000457790 269 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN20P56880 AC087477.1-201ENST00000465747 340 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 RPL30P10-201ENST00000488148 337 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 HMGN1P13-201ENST00000505795 138 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN20P56880 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN20P56880 AC005520.5-201ENST00000613926 164 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 MIR6817-201ENST00000615588 66 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AC008121.3-201ENST00000618726 433 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AL160413.1-201ENST00000622780 310 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN20P56880 AC006026.1-201ENST00000444025 1803 ntBASIC2.32□□□□□ -2.04
CLDN20P56880 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN20P56880 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN20P56880 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN20P56880 RNU6-1159P-201ENST00000362933 107 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 RNY1P16-201ENST00000363063 111 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 SNORD115-32-201ENST00000364079 82 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 RNA5SP240-201ENST00000365355 128 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLDN20P56880 RNA5SP201-201ENST00000410316 124 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 HMGB3P2-201ENST00000411913 584 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN20P56880 AL353997.1-201ENST00000432936 108 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN20P56880 OR2AQ1P-201ENST00000451972 200 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 snoU13.30-201ENST00000458951 104 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC068781.1-201ENST00000488231 618 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 RPL17P19-201ENST00000489069 552 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC145146.1-201ENST00000496370 254 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC022493.2-201ENST00000506122 481 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC107222.1-201ENST00000510899 637 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC093303.1-201ENST00000514549 295 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 RNU6-264P-201ENST00000517134 104 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 RNU6-586P-201ENST00000517265 104 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN20P56880 AC104581.2-201ENST00000572227 430 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 MIR5701-3-201ENST00000578890 82 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 MIR5701-1-201ENST00000585138 82 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 CYP2C61P-201ENST00000604072 290 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AC080078.3-201ENST00000605407 463 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN20P56880 MIR5701-2-201ENST00000615634 82 ntBASIC2.31□□□□□ -2.04
CLDN20P56880 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN20P56880 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CLDN20P56880 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN20P56880 RNU6-1040P-201ENST00000383974 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms