Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.12□□□□□ -2.59
CLTCL1P53675 MTND1P17-201ENST00000448961 204 ntBASIC-1.12□□□□□ -2.59
CLTCL1P53675 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.12□□□□□ -2.59
CLTCL1P53675 AC018630.3-201ENST00000542637 96 ntBASIC-1.12□□□□□ -2.59
CLTCL1P53675 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.12□□□□□ -2.59
CLTCL1P53675 AC034229.4-201ENST00000607861 441 ntBASIC-1.12□□□□□ -2.59
CLTCL1P53675 SNORD82-201ENST00000365530 70 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 MIR573-201ENST00000384964 99 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 RNU2-33P-201ENST00000410344 192 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 MTND4P32-201ENST00000437189 1237 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 AC023512.1-201ENST00000444513 499 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 AC023194.1-201ENST00000493084 308 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 RNU2-53P-201ENST00000516257 147 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1.13□□□□□ -2.59
CLTCL1P53675 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-1.13□□□□□ -2.59
CLTCL1P53675 AL109659.3-201ENST00000624985 950 ntBASIC-1.13□□□□□ -2.59
CLTCL1P53675 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.14□□□□□ -2.59
CLTCL1P53675 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.14□□□□□ -2.59
CLTCL1P53675 AC109445.1-201ENST00000512356 383 ntBASIC-1.14□□□□□ -2.59
CLTCL1P53675 SNORA70.12-201ENST00000516084 153 ntBASIC-1.14□□□□□ -2.59
CLTCL1P53675 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.14□□□□□ -2.59
CLTCL1P53675 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-1.14□□□□□ -2.59
CLTCL1P53675 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-1.14□□□□□ -2.59
CLTCL1P53675 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
CLTCL1P53675 RNU6-1280P-201ENST00000365211 107 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 RNY1P7-201ENST00000384743 110 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AC123900.1-201ENST00000420390 96 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 MRPL42P4-201ENST00000453267 443 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-1.15□□□□□ -2.59
CLTCL1P53675 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-1.15□□□□□ -2.59
CLTCL1P53675 AC137800.2-201ENST00000574375 120 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 MIR4788-201ENST00000639104 80 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 RNY4P16-201ENST00000364768 94 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 RAP1BP3-201ENST00000407180 549 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.15□□□□□ -2.59
CLTCL1P53675 RAC1P6-201ENST00000423911 575 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-1.15□□□□□ -2.59
CLTCL1P53675 MTCO3P29-201ENST00000432119 779 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 RNU6-488P-201ENST00000515918 99 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 SUMO2P18-201ENST00000518873 252 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 LRRC34P1-201ENST00000542742 915 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AC104695.3-201ENST00000604052 296 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AL358072.1-201ENST00000604156 575 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 AL162726.3-218ENST00000636401 95 ntBASIC-1.15□□□□□ -2.59
CLTCL1P53675 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.15□□□□□ -2.59
CLTCL1P53675 RNU6-529P-201ENST00000363383 104 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 RNU6-10P-201ENST00000384036 107 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 RNU6-15P-201ENST00000384534 107 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 MIR653-201ENST00000385279 96 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 AC027644.1-201ENST00000419595 298 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 RNA5SP290-201ENST00000517133 127 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.16□□□□□ -2.6
CLTCL1P53675 MIR6079-201ENST00000635807 62 ntBASIC-1.16□□□□□ -2.6
CLTCL1P53675 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-1.17□□□□□ -2.6
CLTCL1P53675 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
CLTCL1P53675 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLTCL1P53675 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLTCL1P53675 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLTCL1P53675 MIR4263-201ENST00000584745 83 ntBASIC-1.17□□□□□ -2.6
CLTCL1P53675 AC004067.1-201ENST00000608733 700 ntBASIC-1.17□□□□□ -2.6
CLTCL1P53675 uc_338.28-201ENST00000612082 187 ntBASIC-1.17□□□□□ -2.6
CLTCL1P53675 SEPT14P17-201ENST00000617978 177 ntBASIC-1.17□□□□□ -2.6
CLTCL1P53675 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-1.17□□□□□ -2.6
CLTCL1P53675 MIR412-201ENST00000362142 91 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 RNU6-152P-201ENST00000384037 107 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC119618.1-201ENST00000434191 222 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC069257.2-201ENST00000441819 155 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
CLTCL1P53675 RNU6-390P-201ENST00000516259 103 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AP002453.2-201ENST00000533503 320 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC239868.4-201ENST00000608318 671 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 uc_338.16-201ENST00000621804 95 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 SNORD111-201ENST00000408139 94 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 SNORD83.1-201ENST00000411362 77 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AL353997.1-201ENST00000432936 108 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 STAG3L5P-204ENST00000443759 179 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC012308.1-201ENST00000451232 178 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC245047.8-201ENST00000456455 284 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AL160314.1-201ENST00000490836 438 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-1.18□□□□□ -2.6
CLTCL1P53675 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC010809.3-201ENST00000621310 641 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 AC106754.2-201ENST00000623006 233 ntBASIC-1.18□□□□□ -2.6
CLTCL1P53675 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.19□□□□□ -2.6
CLTCL1P53675 AL603865.2-201ENST00000401679 213 ntBASIC-1.19□□□□□ -2.6
CLTCL1P53675 AC068533.2-201ENST00000411872 306 ntBASIC-1.19□□□□□ -2.6
CLTCL1P53675 AP002001.1-203ENST00000534002 267 ntBASIC-1.19□□□□□ -2.6
CLTCL1P53675 AC006504.8-201ENST00000621046 635 ntBASIC-1.19□□□□□ -2.6
CLTCL1P53675 SNORA4.2-201ENST00000365313 147 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 SNORA8.2-201ENST00000384372 139 ntBASIC-1.2□□□□□ -2.6
CLTCL1P53675 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.2□□□□□ -2.6
CLTCL1P53675 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.2□□□□□ -2.6
CLTCL1P53675 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-1.2□□□□□ -2.6
CLTCL1P53675 AC093012.1-202ENST00000549403 582 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms