Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR3670-2-201ENST00000582974 65 ntBASIC2.89□□□□□ -1.95
COPB1P53618 MIR3670-1-201ENST00000584160 65 ntBASIC2.89□□□□□ -1.95
COPB1P53618 MIR3670-3-201ENST00000584855 65 ntBASIC2.89□□□□□ -1.95
COPB1P53618 Z98751.3-201ENST00000604447 521 ntBASIC2.89□□□□□ -1.95
COPB1P53618 MIR3670-4-201ENST00000612260 65 ntBASIC2.89□□□□□ -1.95
COPB1P53618 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
COPB1P53618 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COPB1P53618 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
COPB1P53618 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.88□□□□□ -1.95
COPB1P53618 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COPB1P53618 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COPB1P53618 RNU6-1285P-201ENST00000363480 105 ntBASIC2.88□□□□□ -1.95
COPB1P53618 SNORA25.6-201ENST00000364121 118 ntBASIC2.88□□□□□ -1.95
COPB1P53618 Y_RNA.380-201ENST00000365663 111 ntBASIC2.88□□□□□ -1.95
COPB1P53618 SNORA29-201ENST00000384183 140 ntBASIC2.88□□□□□ -1.95
COPB1P53618 RNU6-301P-201ENST00000384277 107 ntBASIC2.88□□□□□ -1.95
COPB1P53618 RNU6-748P-201ENST00000384648 107 ntBASIC2.88□□□□□ -1.95
COPB1P53618 RNU6-19P-201ENST00000384718 107 ntBASIC2.88□□□□□ -1.95
COPB1P53618 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
COPB1P53618 SNORA69.1-201ENST00000390904 137 ntBASIC2.88□□□□□ -1.95
COPB1P53618 RNU6-101P-201ENST00000410323 104 ntBASIC2.88□□□□□ -1.95
COPB1P53618 PTGES3P4-201ENST00000426243 356 ntBASIC2.88□□□□□ -1.95
COPB1P53618 MTCYBP9-201ENST00000431021 303 ntBASIC2.88□□□□□ -1.95
COPB1P53618 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.88□□□□□ -1.95
COPB1P53618 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.88□□□□□ -1.95
COPB1P53618 snoU13.30-201ENST00000458951 104 ntBASIC2.88□□□□□ -1.95
COPB1P53618 AC010655.3-201ENST00000478818 450 ntBASIC2.88□□□□□ -1.95
COPB1P53618 AC104564.1-201ENST00000493028 407 ntBASIC2.88□□□□□ -1.95
COPB1P53618 MTCO2P24-201ENST00000515611 426 ntBASIC2.88□□□□□ -1.95
COPB1P53618 RNU7-175P-201ENST00000515915 61 ntBASIC2.88□□□□□ -1.95
COPB1P53618 HSPE1P20-201ENST00000538133 289 ntBASIC2.88□□□□□ -1.95
COPB1P53618 AC006600.1-201ENST00000572529 153 ntBASIC2.88□□□□□ -1.95
COPB1P53618 MIR5571-201ENST00000577998 113 ntBASIC2.88□□□□□ -1.95
COPB1P53618 AL356575.1-201ENST00000603008 283 ntBASIC2.88□□□□□ -1.95
COPB1P53618 AL391813.1-201ENST00000603098 260 ntBASIC2.88□□□□□ -1.95
COPB1P53618 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.88□□□□□ -1.95
COPB1P53618 AL132822.1-201ENST00000617063 513 ntBASIC2.88□□□□□ -1.95
COPB1P53618 U2.1-201ENST00000618978 145 ntBASIC2.88□□□□□ -1.95
COPB1P53618 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COPB1P53618 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.88□□□□□ -1.95
COPB1P53618 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COPB1P53618 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.87□□□□□ -1.95
COPB1P53618 AP000560.1-201ENST00000624150 1937 ntBASIC2.87□□□□□ -1.95
COPB1P53618 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
COPB1P53618 Y_RNA.424-201ENST00000384063 103 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RPL21P75-201ENST00000396599 483 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RPL21P28-201ENST00000401418 483 ntBASIC2.87□□□□□ -1.95
COPB1P53618 MIR1252-201ENST00000408861 65 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC096649.2-201ENST00000416186 393 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC087499.2-201ENST00000432861 149 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RPL39P29-201ENST00000447779 157 ntBASIC2.87□□□□□ -1.95
COPB1P53618 OR2AQ1P-201ENST00000451972 200 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RPL21P39-201ENST00000463605 483 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC087190.1-201ENST00000484462 480 ntBASIC2.87□□□□□ -1.95
COPB1P53618 SRIP1-201ENST00000489235 288 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC093591.1-201ENST00000491435 481 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RPL21P16-201ENST00000495531 483 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RNA5SP367-201ENST00000516557 118 ntBASIC2.87□□□□□ -1.95
COPB1P53618 COX6CP5-201ENST00000527162 228 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC040926.1-201ENST00000530195 238 ntBASIC2.87□□□□□ -1.95
COPB1P53618 GTF3AP2-201ENST00000557014 266 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC008269.2-201ENST00000561915 1105 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.87□□□□□ -1.95
COPB1P53618 AC025281.1-201ENST00000567026 265 ntBASIC2.87□□□□□ -1.95
COPB1P53618 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.87□□□□□ -1.95
COPB1P53618 MIR4672-201ENST00000583126 81 ntBASIC2.87□□□□□ -1.95
COPB1P53618 RPL23AP78-201ENST00000599928 470 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AL355297.3-201ENST00000604082 446 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC124312.5-201ENST00000604451 268 ntBASIC2.87□□□□□ -1.95
COPB1P53618 PRR13P7-201ENST00000605538 430 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AC100812.1-201ENST00000607622 580 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AL021879.1-201ENST00000611756 288 ntBASIC2.87□□□□□ -1.95
COPB1P53618 AL159153.1-201ENST00000619688 317 ntBASIC2.87□□□□□ -1.95
COPB1P53618 7SK.10-201ENST00000621414 298 ntBASIC2.87□□□□□ -1.95
COPB1P53618 Z82195.2-201ENST00000612348 18351 ntBASIC2.86□□□□□ -1.95
COPB1P53618 SNORD115-32-201ENST00000364079 82 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RNU6-26P-201ENST00000383985 107 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RNU6-17P-201ENST00000384245 107 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RNU6-18P-201ENST00000384527 107 ntBASIC2.86□□□□□ -1.95
COPB1P53618 SNORA26.3-201ENST00000391119 136 ntBASIC2.86□□□□□ -1.95
COPB1P53618 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.86□□□□□ -1.95
COPB1P53618 AC078809.1-201ENST00000427601 140 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RPL23AP58-201ENST00000440453 469 ntBASIC2.86□□□□□ -1.95
COPB1P53618 IPO7P1-201ENST00000442031 636 ntBASIC2.86□□□□□ -1.95
COPB1P53618 AC009296.1-201ENST00000443146 155 ntBASIC2.86□□□□□ -1.95
COPB1P53618 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.86□□□□□ -1.95
COPB1P53618 AL353705.4-201ENST00000449661 238 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RPL30P12-201ENST00000474666 353 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RNA5SP356-201ENST00000515972 94 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RNA5SP282-201ENST00000516355 108 ntBASIC2.86□□□□□ -1.95
COPB1P53618 Y_RNA.715-201ENST00000517082 110 ntBASIC2.86□□□□□ -1.95
COPB1P53618 AC109329.1-201ENST00000518744 317 ntBASIC2.86□□□□□ -1.95
COPB1P53618 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.86□□□□□ -1.95
COPB1P53618 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.86□□□□□ -1.95
COPB1P53618 HSPE1P4-201ENST00000550617 308 ntBASIC2.86□□□□□ -1.95
COPB1P53618 MIR4503-201ENST00000582187 83 ntBASIC2.86□□□□□ -1.95
COPB1P53618 MIR4435-1-201ENST00000582552 80 ntBASIC2.86□□□□□ -1.95
COPB1P53618 7SK.7-201ENST00000603504 247 ntBASIC2.86□□□□□ -1.95
COPB1P53618 RNU6-91P-201ENST00000607774 107 ntBASIC2.86□□□□□ -1.95
COPB1P53618 AC243829.7-201ENST00000633081 225 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms