Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL121601.2-201ENST00000438019 707 ntBASIC1.87□□□□□ -2.11
GPC3P51654 MTND1P34-201ENST00000438556 671 ntBASIC1.87□□□□□ -2.11
GPC3P51654 TPTE2P5-203ENST00000458118 728 ntBASIC1.87□□□□□ -2.11
GPC3P51654 Y_RNA.654-201ENST00000497848 106 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC019235.1-201ENST00000503847 207 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC087854.1-201ENST00000519706 414 ntBASIC1.87□□□□□ -2.11
GPC3P51654 TRAV32-201ENST00000553993 340 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AL157687.1-201ENST00000554853 619 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.87□□□□□ -2.11
GPC3P51654 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
GPC3P51654 MIR3136-201ENST00000583498 78 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AL034555.1-201ENST00000604816 211 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC018889.1-201ENST00000605372 397 ntBASIC1.87□□□□□ -2.11
GPC3P51654 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GPC3P51654 RMST_6.1-201ENST00000611980 203 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC103705.1-201ENST00000619013 241 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC068792.1-201ENST00000621354 417 ntBASIC1.87□□□□□ -2.11
GPC3P51654 MIR1248-201ENST00000629190 106 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AP000560.1-201ENST00000624150 1937 ntBASIC1.87□□□□□ -2.11
GPC3P51654 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GPC3P51654 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GPC3P51654 RNA5SP219-201ENST00000390940 113 ntBASIC1.86□□□□□ -2.11
GPC3P51654 CALM2P3-201ENST00000400429 449 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC009310.1-201ENST00000414414 451 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.86□□□□□ -2.11
GPC3P51654 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.86□□□□□ -2.11
GPC3P51654 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.86□□□□□ -2.11
GPC3P51654 AC112492.4-201ENST00000456549 352 ntBASIC1.86□□□□□ -2.11
GPC3P51654 RNU6-333P-201ENST00000459117 107 ntBASIC1.86□□□□□ -2.11
GPC3P51654 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
GPC3P51654 RNU6-1281P-201ENST00000516223 105 ntBASIC1.86□□□□□ -2.11
GPC3P51654 RNU6-835P-201ENST00000516974 104 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.86□□□□□ -2.11
GPC3P51654 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.86□□□□□ -2.11
GPC3P51654 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.86□□□□□ -2.11
GPC3P51654 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC104581.2-201ENST00000572227 430 ntBASIC1.86□□□□□ -2.11
GPC3P51654 EIF1P4-201ENST00000572664 335 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
GPC3P51654 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.86□□□□□ -2.11
GPC3P51654 VN1R80P-201ENST00000597126 338 ntBASIC1.86□□□□□ -2.11
GPC3P51654 AC004492.1-201ENST00000607036 742 ntBASIC1.86□□□□□ -2.11
GPC3P51654 DISC2.1-201ENST00000612827 205 ntBASIC1.86□□□□□ -2.11
GPC3P51654 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.86□□□□□ -2.11
GPC3P51654 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
GPC3P51654 RNU6-1141P-201ENST00000364520 107 ntBASIC1.85□□□□□ -2.11
GPC3P51654 RNU6-38P-201ENST00000384085 107 ntBASIC1.85□□□□□ -2.11
GPC3P51654 RNU6-648P-201ENST00000410190 107 ntBASIC1.85□□□□□ -2.11
GPC3P51654 RNU6-293P-201ENST00000411259 106 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AL117339.3-201ENST00000418733 162 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.85□□□□□ -2.11
GPC3P51654 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.85□□□□□ -2.11
GPC3P51654 AL035666.1-201ENST00000446195 348 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AL031274.1-201ENST00000450334 232 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.85□□□□□ -2.11
GPC3P51654 AC087884.1-201ENST00000469738 328 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AK3P2-201ENST00000507976 429 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.85□□□□□ -2.11
GPC3P51654 CBX3P4-201ENST00000538909 354 ntBASIC1.85□□□□□ -2.11
GPC3P51654 RNU6-85P-201ENST00000605989 107 ntBASIC1.85□□□□□ -2.11
GPC3P51654 AC068137.3-201ENST00000639191 341 ntBASIC1.85□□□□□ -2.11
GPC3P51654 RNU6-1285P-201ENST00000363480 105 ntBASIC1.84□□□□□ -2.11
GPC3P51654 RNU6-336P-201ENST00000364891 107 ntBASIC1.84□□□□□ -2.11
GPC3P51654 Y_RNA.318-201ENST00000365131 97 ntBASIC1.84□□□□□ -2.11
GPC3P51654 Y_RNA.381-201ENST00000365666 102 ntBASIC1.84□□□□□ -2.11
GPC3P51654 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
GPC3P51654 SNORD116-4-201ENST00000384733 96 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.84□□□□□ -2.11
GPC3P51654 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.84□□□□□ -2.11
GPC3P51654 AC078809.1-201ENST00000427601 140 ntBASIC1.84□□□□□ -2.11
GPC3P51654 DLGAP5P1-201ENST00000430307 464 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AC243964.1-201ENST00000441814 261 ntBASIC1.84□□□□□ -2.11
GPC3P51654 MTCO2P3-201ENST00000442543 421 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.84□□□□□ -2.11
GPC3P51654 SNRPGP7-201ENST00000469016 106 ntBASIC1.84□□□□□ -2.11
GPC3P51654 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.84□□□□□ -2.11
GPC3P51654 AC027575.1-201ENST00000481064 460 ntBASIC1.84□□□□□ -2.11
GPC3P51654 CCDC34P1-201ENST00000507441 517 ntBASIC1.84□□□□□ -2.11
GPC3P51654 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
GPC3P51654 RNU6-720P-201ENST00000516363 108 ntBASIC1.84□□□□□ -2.11
GPC3P51654 RNU6-314P-201ENST00000516574 104 ntBASIC1.84□□□□□ -2.11
GPC3P51654 RNA5SP490-201ENST00000517141 136 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.84□□□□□ -2.11
GPC3P51654 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.84□□□□□ -2.11
GPC3P51654 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.84□□□□□ -2.11
GPC3P51654 MIR5583-1-201ENST00000580941 59 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AC010928.2-201ENST00000588017 287 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AC092747.3-201ENST00000603769 301 ntBASIC1.84□□□□□ -2.11
GPC3P51654 AC123912.5-201ENST00000605470 343 ntBASIC1.84□□□□□ -2.11
GPC3P51654 U4.5-201ENST00000617137 123 ntBASIC1.84□□□□□ -2.11
GPC3P51654 SNORD98-201ENST00000636377 67 ntBASIC1.84□□□□□ -2.11
GPC3P51654 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
GPC3P51654 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
GPC3P51654 Y_RNA.9-201ENST00000362354 101 ntBASIC1.83□□□□□ -2.12
GPC3P51654 Y_RNA.372-201ENST00000365599 102 ntBASIC1.83□□□□□ -2.12
GPC3P51654 RNU6-142P-201ENST00000384019 107 ntBASIC1.83□□□□□ -2.12
GPC3P51654 SNORA48.1-201ENST00000390879 135 ntBASIC1.83□□□□□ -2.12
GPC3P51654 EIF4E2P1-201ENST00000393781 255 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms