Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2□□□□□ -2.09
HCFC1P51610 AL714022.1-201ENST00000439897 151 ntBASIC2□□□□□ -2.09
HCFC1P51610 RPL36AP48-201ENST00000485521 314 ntBASIC2□□□□□ -2.09
HCFC1P51610 AP001025.1-201ENST00000486139 332 ntBASIC2□□□□□ -2.09
HCFC1P51610 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2□□□□□ -2.09
HCFC1P51610 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2□□□□□ -2.09
HCFC1P51610 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2□□□□□ -2.09
HCFC1P51610 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2□□□□□ -2.09
HCFC1P51610 AC109446.1-201ENST00000566172 220 ntBASIC2□□□□□ -2.09
HCFC1P51610 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2□□□□□ -2.09
HCFC1P51610 RPS15AP11-201ENST00000594193 385 ntBASIC2□□□□□ -2.09
HCFC1P51610 AL356055.1-201ENST00000602528 446 ntBASIC2□□□□□ -2.09
HCFC1P51610 AL391813.1-201ENST00000603098 260 ntBASIC2□□□□□ -2.09
HCFC1P51610 AC080078.3-201ENST00000605407 463 ntBASIC2□□□□□ -2.09
HCFC1P51610 FO624990.1-201ENST00000636373 85 ntBASIC2□□□□□ -2.09
HCFC1P51610 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
HCFC1P51610 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
HCFC1P51610 Y_RNA.394-201ENST00000383942 103 ntBASIC2□□□□□ -2.09
HCFC1P51610 RNU6-308P-201ENST00000390957 107 ntBASIC2□□□□□ -2.09
HCFC1P51610 RNU6-101P-201ENST00000410323 104 ntBASIC2□□□□□ -2.09
HCFC1P51610 AC079354.2-201ENST00000453523 154 ntBASIC2□□□□□ -2.09
HCFC1P51610 AC107626.1-201ENST00000471084 183 ntBASIC2□□□□□ -2.09
HCFC1P51610 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2□□□□□ -2.09
HCFC1P51610 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2□□□□□ -2.09
HCFC1P51610 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2□□□□□ -2.09
HCFC1P51610 SUB1P3-201ENST00000564581 315 ntBASIC2□□□□□ -2.09
HCFC1P51610 MIR4446-201ENST00000578505 67 ntBASIC2□□□□□ -2.09
HCFC1P51610 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2□□□□□ -2.09
HCFC1P51610 AL356280.1-201ENST00000603614 379 ntBASIC2□□□□□ -2.09
HCFC1P51610 AL355877.2-201ENST00000603670 358 ntBASIC2□□□□□ -2.09
HCFC1P51610 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2□□□□□ -2.09
HCFC1P51610 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HCFC1P51610 AC233981.2-201ENST00000611524 1614 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 SNORD56.1-201ENST00000362913 68 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 RNU6-336P-201ENST00000364891 107 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 RNU6-890P-201ENST00000384121 107 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 SNORA26.3-201ENST00000391119 136 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HCFC1P51610 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.99□□□□□ -2.09
HCFC1P51610 AL354751.2-201ENST00000415471 210 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AL365496.1-201ENST00000426885 215 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 RPL23AP50-201ENST00000434149 455 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AC099799.1-201ENST00000439809 192 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AL441985.1-201ENST00000457727 251 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AC114801.2-201ENST00000503825 781 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AC007375.1-201ENST00000554513 578 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 ANP32BP3-201ENST00000559213 706 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AC008739.2-201ENST00000597006 317 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 SNORD58B-201ENST00000607313 66 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 uc_338.22-201ENST00000622722 187 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AC002064.3-201ENST00000623448 346 ntBASIC1.99□□□□□ -2.09
HCFC1P51610 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.99□□□□□ -2.09
HCFC1P51610 RBBP8P1-201ENST00000449447 1844 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HCFC1P51610 RNU6-1210P-201ENST00000363775 107 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 Y_RNA.197-201ENST00000364004 102 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 RNU6-1141P-201ENST00000364520 107 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 SNORA22B-201ENST00000383876 138 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 SNORA64-201ENST00000384674 134 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MIR544A-201ENST00000384855 91 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MRPL42P3-201ENST00000401492 326 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MCFD2P1-201ENST00000417812 300 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.98□□□□□ -2.09
HCFC1P51610 LINC00933-203ENST00000559812 219 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC100830.2-201ENST00000581636 240 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC011890.2-201ENST00000613393 294 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MIR3199-2-201ENST00000636243 86 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MIR3529-201ENST00000637713 78 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MTND5P9-201ENST00000503854 1755 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 U3.13-201ENST00000364804 214 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 RNU1-51P-201ENST00000365345 176 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 RNU6-1040P-201ENST00000383974 107 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MIR521-1-201ENST00000384902 87 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 U8.13-201ENST00000390842 128 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.98□□□□□ -2.09
HCFC1P51610 AC007969.2-201ENST00000441891 191 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 Z96811.1-201ENST00000445880 108 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 snoU13.30-201ENST00000458951 104 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MED28P2-201ENST00000475771 317 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.98□□□□□ -2.09
HCFC1P51610 AC021146.2-201ENST00000504736 556 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC116655.1-201ENST00000508324 901 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC005741.1-201ENST00000511094 432 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 AC093303.1-201ENST00000514549 295 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 SNORA31.16-201ENST00000516773 139 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.98□□□□□ -2.09
HCFC1P51610 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HCFC1P51610 AP001836.1-201ENST00000604675 523 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 MIR1291-201ENST00000627649 87 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.98□□□□□ -2.09
HCFC1P51610 ZNF72P-201ENST00000425869 1908 ntBASIC1.98□□□□□ -2.09
HCFC1P51610 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
HCFC1P51610 AC135776.4-201ENST00000624300 1904 ntBASIC1.97□□□□□ -2.09
HCFC1P51610 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HCFC1P51610 SNORA63-201ENST00000363450 132 ntBASIC1.97□□□□□ -2.09
HCFC1P51610 SNORD115-8-201ENST00000363856 82 ntBASIC1.97□□□□□ -2.09
HCFC1P51610 SNORD115-38-201ENST00000365037 82 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 1172.3 ms