Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PRIM1P49642 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRIM1P49642 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRIM1P49642 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRIM1P49642 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRIM1P49642 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.17□□□□□ -1.58
PRIM1P49642 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.17□□□□□ -1.58
PRIM1P49642 SNORD74.4-201ENST00000364129 80 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 MIR607-201ENST00000385241 96 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 RPS29P4-201ENST00000414733 161 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 AL035423.1-201ENST00000420331 213 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 AC004386.2-201ENST00000441858 148 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.17□□□□□ -1.58
PRIM1P49642 RN7SL293P-201ENST00000481765 281 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 RNU6-772P-201ENST00000516042 105 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 RNU6-168P-201ENST00000516189 101 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 MIR378D2-201ENST00000580636 98 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 MIR5006-201ENST00000583027 110 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.17□□□□□ -1.58
PRIM1P49642 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PRIM1P49642 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRIM1P49642 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PRIM1P49642 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
PRIM1P49642 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRIM1P49642 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRIM1P49642 MAPK10-372ENST00000641954 3413 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.16□□□□□ -1.58
PRIM1P49642 RNA5SP399-201ENST00000364003 117 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.16□□□□□ -1.58
PRIM1P49642 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.16□□□□□ -1.58
PRIM1P49642 AC078918.1-201ENST00000498515 228 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 AC104619.4-201ENST00000510773 249 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.16□□□□□ -1.58
PRIM1P49642 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.16□□□□□ -1.58
PRIM1P49642 AC012640.5-201ENST00000623897 319 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 AC018692.3-201ENST00000623929 123 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PRIM1P49642 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRIM1P49642 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PRIM1P49642 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PRIM1P49642 AL513302.2-201ENST00000562313 1842 ntBASIC5.16□□□□□ -1.58
PRIM1P49642 AL159152.1-201ENST00000635019 2587 ntBASIC5.15□□□□□ -1.58
PRIM1P49642 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PRIM1P49642 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PRIM1P49642 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.15□□□□□ -1.58
PRIM1P49642 RNU1-75P-201ENST00000347264 129 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 Y_RNA.120-201ENST00000363304 110 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 U1.1-201ENST00000384101 164 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 RNU6-748P-201ENST00000384648 107 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 RNVU1-14-201ENST00000384770 164 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 RNA5SP104-201ENST00000410989 118 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 AL139247.1-201ENST00000422768 325 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 AC027124.2-201ENST00000428249 105 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 HSPE1P21-201ENST00000438283 308 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.15□□□□□ -1.59
PRIM1P49642 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.15□□□□□ -1.59
PRIM1P49642 snoU13.14-201ENST00000459372 104 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 AC023141.12-201ENST00000512399 199 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 SNORD19.2-201ENST00000516978 73 ntBASIC5.15□□□□□ -1.59
PRIM1P49642 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.15□□□□□ -1.59
PRIM1P49642 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRIM1P49642 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRIM1P49642 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRIM1P49642 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.14□□□□□ -1.59
PRIM1P49642 AC011266.1-201ENST00000624119 3569 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRIM1P49642 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.14□□□□□ -1.59
PRIM1P49642 RNU6-1010P-201ENST00000362757 107 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 RNA5SP72-201ENST00000364442 117 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 SNORD87-201ENST00000364849 89 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 RNA5SP97-201ENST00000365006 84 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 RNU2-55P-201ENST00000411146 174 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 AL161651.1-201ENST00000440882 223 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 AL133162.1-201ENST00000463228 453 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 AC106707.2-201ENST00000484182 374 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 MIR548AY-201ENST00000617669 107 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 MIR7975-201ENST00000619350 68 ntBASIC5.14□□□□□ -1.59
PRIM1P49642 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.14□□□□□ -1.59
PRIM1P49642 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PRIM1P49642 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRIM1P49642 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRIM1P49642 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRIM1P49642 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PRIM1P49642 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
PRIM1P49642 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRIM1P49642 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRIM1P49642 MTND5P32-201ENST00000560711 1802 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRIM1P49642 AC007496.3-201ENST00000624987 3443 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.13□□□□□ -1.59
PRIM1P49642 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRIM1P49642 RNA5SP496-201ENST00000391240 109 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 RNA5SP89-201ENST00000410300 108 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 AL158147.1-201ENST00000443970 75 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.13□□□□□ -1.59
PRIM1P49642 AC025445.1-201ENST00000502728 300 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 RNU6-561P-201ENST00000516222 102 ntBASIC5.13□□□□□ -1.59
PRIM1P49642 RNU1-117P-201ENST00000517041 158 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms