Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MIR3651-201ENST00000630427 90 ntBASIC2.53□□□□□ -2
CENPAP49450 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CENPAP49450 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
CENPAP49450 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.53□□□□□ -2
CENPAP49450 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CENPAP49450 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
CENPAP49450 RNU5B-2P-201ENST00000363036 113 ntBASIC2.52□□□□□ -2.01
CENPAP49450 SNORA25.6-201ENST00000364121 118 ntBASIC2.52□□□□□ -2.01
CENPAP49450 Y_RNA.405-201ENST00000383979 100 ntBASIC2.52□□□□□ -2.01
CENPAP49450 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
CENPAP49450 Y_RNA.445-201ENST00000384168 102 ntBASIC2.52□□□□□ -2.01
CENPAP49450 Y_RNA.451-201ENST00000384200 100 ntBASIC2.52□□□□□ -2.01
CENPAP49450 Y_RNA.524-201ENST00000384564 100 ntBASIC2.52□□□□□ -2.01
CENPAP49450 Y_RNA.561-201ENST00000384694 100 ntBASIC2.52□□□□□ -2.01
CENPAP49450 MIR32-201ENST00000384965 70 ntBASIC2.52□□□□□ -2.01
CENPAP49450 SNORA26.3-201ENST00000391119 136 ntBASIC2.52□□□□□ -2.01
CENPAP49450 U6atac.2-201ENST00000408644 118 ntBASIC2.52□□□□□ -2.01
CENPAP49450 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.52□□□□□ -2.01
CENPAP49450 MTCO3P29-201ENST00000432119 779 ntBASIC2.52□□□□□ -2.01
CENPAP49450 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.52□□□□□ -2.01
CENPAP49450 snoU13.30-201ENST00000458951 104 ntBASIC2.52□□□□□ -2.01
CENPAP49450 CKS1BP2-201ENST00000497342 240 ntBASIC2.52□□□□□ -2.01
CENPAP49450 AC022080.3-201ENST00000544433 482 ntBASIC2.52□□□□□ -2.01
CENPAP49450 YPEL5P2-201ENST00000605553 359 ntBASIC2.52□□□□□ -2.01
CENPAP49450 SCARNA4-201ENST00000629045 128 ntBASIC2.52□□□□□ -2.01
CENPAP49450 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
CENPAP49450 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
CENPAP49450 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
CENPAP49450 Y_RNA.138-201ENST00000363462 102 ntBASIC2.51□□□□□ -2.01
CENPAP49450 RNU6-1032P-201ENST00000384100 107 ntBASIC2.51□□□□□ -2.01
CENPAP49450 RNU6-1011P-201ENST00000384668 107 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MIR559-201ENST00000385188 96 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MIR634-201ENST00000385208 97 ntBASIC2.51□□□□□ -2.01
CENPAP49450 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.51□□□□□ -2.01
CENPAP49450 Z92545.1-201ENST00000411782 234 ntBASIC2.51□□□□□ -2.01
CENPAP49450 AC007098.1-201ENST00000420122 367 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MTCYBP10-201ENST00000424905 650 ntBASIC2.51□□□□□ -2.01
CENPAP49450 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.51□□□□□ -2.01
CENPAP49450 IFNA11P-201ENST00000446352 526 ntBASIC2.51□□□□□ -2.01
CENPAP49450 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.51□□□□□ -2.01
CENPAP49450 AL353752.1-201ENST00000454946 260 ntBASIC2.51□□□□□ -2.01
CENPAP49450 TOMM22P6-201ENST00000465035 409 ntBASIC2.51□□□□□ -2.01
CENPAP49450 AC090515.1-201ENST00000465295 476 ntBASIC2.51□□□□□ -2.01
CENPAP49450 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.51□□□□□ -2.01
CENPAP49450 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.51□□□□□ -2.01
CENPAP49450 RNU6-976P-201ENST00000516086 111 ntBASIC2.51□□□□□ -2.01
CENPAP49450 Y_RNA.706-201ENST00000516933 99 ntBASIC2.51□□□□□ -2.01
CENPAP49450 RN7SKP57-201ENST00000517248 293 ntBASIC2.51□□□□□ -2.01
CENPAP49450 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.51□□□□□ -2.01
CENPAP49450 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.51□□□□□ -2.01
CENPAP49450 AC004584.2-201ENST00000570407 410 ntBASIC2.51□□□□□ -2.01
CENPAP49450 AC005000.2-201ENST00000605468 310 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MIR1244-1-201ENST00000612829 85 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MIR1244-3-201ENST00000635744 85 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MIR1244-2-201ENST00000636449 85 ntBASIC2.51□□□□□ -2.01
CENPAP49450 MIR1244-4-202ENST00000636813 85 ntBASIC2.51□□□□□ -2.01
CENPAP49450 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CENPAP49450 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CENPAP49450 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.5□□□□□ -2.01
CENPAP49450 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CENPAP49450 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
CENPAP49450 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
CENPAP49450 Y_RNA.314-201ENST00000365114 102 ntBASIC2.5□□□□□ -2.01
CENPAP49450 SNORD42.2-201ENST00000365570 69 ntBASIC2.5□□□□□ -2.01
CENPAP49450 Y_RNA.428-201ENST00000384078 102 ntBASIC2.5□□□□□ -2.01
CENPAP49450 Y_RNA.463-201ENST00000384271 102 ntBASIC2.5□□□□□ -2.01
CENPAP49450 Y_RNA.577-201ENST00000384794 101 ntBASIC2.5□□□□□ -2.01
CENPAP49450 SNORA12.2-201ENST00000391040 156 ntBASIC2.5□□□□□ -2.01
CENPAP49450 SNORA48.5-201ENST00000391143 135 ntBASIC2.5□□□□□ -2.01
CENPAP49450 RNU6-1093P-201ENST00000391194 107 ntBASIC2.5□□□□□ -2.01
CENPAP49450 MIR208B-201ENST00000401172 77 ntBASIC2.5□□□□□ -2.01
CENPAP49450 MIR1302-11-201ENST00000408051 138 ntBASIC2.5□□□□□ -2.01
CENPAP49450 MIR1302-9-201ENST00000408365 138 ntBASIC2.5□□□□□ -2.01
CENPAP49450 MIR1302-10-201ENST00000408734 138 ntBASIC2.5□□□□□ -2.01
CENPAP49450 RNU6-1156P-201ENST00000410365 100 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.5□□□□□ -2.01
CENPAP49450 AL354751.2-201ENST00000415471 210 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
CENPAP49450 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.5□□□□□ -2.01
CENPAP49450 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.5□□□□□ -2.01
CENPAP49450 RPS3P1-201ENST00000456781 192 ntBASIC2.5□□□□□ -2.01
CENPAP49450 RNU7-87P-201ENST00000459343 62 ntBASIC2.5□□□□□ -2.01
CENPAP49450 RPL30P10-201ENST00000488148 337 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC145146.1-201ENST00000496370 254 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC105758.1-201ENST00000506038 399 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.5□□□□□ -2.01
CENPAP49450 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
CENPAP49450 CYP4A27P-201ENST00000567218 190 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC010928.2-201ENST00000588017 287 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.5□□□□□ -2.01
CENPAP49450 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.5□□□□□ -2.01
CENPAP49450 AL356575.1-201ENST00000603008 283 ntBASIC2.5□□□□□ -2.01
CENPAP49450 MIR1302-2-201ENST00000607096 138 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC100812.1-201ENST00000607622 580 ntBASIC2.5□□□□□ -2.01
CENPAP49450 MIR6840-201ENST00000611937 71 ntBASIC2.5□□□□□ -2.01
CENPAP49450 AC137590.2-201ENST00000619709 240 ntBASIC2.5□□□□□ -2.01
CENPAP49450 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.5□□□□□ -2.01
CENPAP49450 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CENPAP49450 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms