Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC109446.1-201ENST00000566172 220 ntBASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.39□□□□□ -2.19
CSNK1A1P48729 AP000654.2-201ENST00000605633 586 ntBASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC245008.1-201ENST00000608123 476 ntBASIC1.39□□□□□ -2.19
CSNK1A1P48729 SNORA43.4-201ENST00000629559 138 ntBASIC1.39□□□□□ -2.19
CSNK1A1P48729 AC092268.1-201ENST00000342691 405 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 RNU4-20P-201ENST00000365601 151 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 RNU6-378P-201ENST00000384324 107 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 Y_RNA.504-201ENST00000384481 104 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 RNU6-160P-201ENST00000384591 107 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AP000275.1-201ENST00000411943 390 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.38□□□□□ -2.19
CSNK1A1P48729 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.38□□□□□ -2.19
CSNK1A1P48729 RNU6-261P-201ENST00000459506 102 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC083798.1-201ENST00000472671 131 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC008628.2-201ENST00000502605 298 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.38□□□□□ -2.19
CSNK1A1P48729 CENPUP1-201ENST00000526649 1202 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC087441.2-201ENST00000529141 262 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 SNORD53B-201ENST00000577887 78 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 MIR3169-201ENST00000578032 83 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 MIR3923-201ENST00000579521 83 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC016925.2-201ENST00000605108 242 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.38□□□□□ -2.19
CSNK1A1P48729 uc_338.5-201ENST00000611839 155 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 PCGEM1.1-201ENST00000613431 131 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 AC103705.1-201ENST00000619013 241 ntBASIC1.38□□□□□ -2.19
CSNK1A1P48729 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSNK1A1P48729 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
CSNK1A1P48729 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CSNK1A1P48729 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNU6-82P-201ENST00000363970 107 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNA5SP493-201ENST00000364115 91 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 Y_RNA.332-201ENST00000365271 113 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 Y_RNA.378-201ENST00000365652 113 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 SNORA69-201ENST00000383895 132 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNU6-259P-201ENST00000383999 107 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 SNORD116-2-201ENST00000384274 95 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 SNORD116-6-201ENST00000384711 96 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 AL513185.2-201ENST00000425543 193 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 MTND1P29-201ENST00000448112 647 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 SNORD13-201ENST00000459299 104 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 AC007547.1-201ENST00000462177 490 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 AC016632.1-201ENST00000503994 196 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 ATP5EP1-201ENST00000510257 156 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNA5SP401-201ENST00000515920 127 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNU6-189P-201ENST00000516120 101 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNU6-1069P-201ENST00000516612 133 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNU6-835P-201ENST00000516974 104 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 RNA5SP490-201ENST00000517141 136 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.37□□□□□ -2.19
CSNK1A1P48729 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.37□□□□□ -2.19
CSNK1A1P48729 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.37□□□□□ -2.19
CSNK1A1P48729 PIGPP4-201ENST00000584447 307 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 Z98751.3-201ENST00000604447 521 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 AC064836.2-201ENST00000609491 462 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 MIR6863-201ENST00000636112 90 ntBASIC1.37□□□□□ -2.19
CSNK1A1P48729 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CSNK1A1P48729 MIR340-201ENST00000362125 95 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNU6-23P-201ENST00000363283 107 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNU6-1322P-201ENST00000364309 107 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNU4-66P-201ENST00000365199 138 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 CALM2P3-201ENST00000400429 449 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 AL357139.1-201ENST00000407792 426 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNA5SP100-201ENST00000410903 110 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNA5SP59-201ENST00000410922 110 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CSNK1A1P48729 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.36□□□□□ -2.19
CSNK1A1P48729 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.36□□□□□ -2.19
CSNK1A1P48729 AMD1P1-201ENST00000457220 922 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 RPS29P27-201ENST00000463711 170 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 AC132942.1-201ENST00000486753 483 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.36□□□□□ -2.19
CSNK1A1P48729 RNVU1-2-201ENST00000516326 135 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 AC092747.3-201ENST00000603769 301 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 AL590240.4-201ENST00000616908 390 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 AL158209.2-201ENST00000619266 216 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.36□□□□□ -2.19
CSNK1A1P48729 AC124864.2-201ENST00000624736 186 ntBASIC1.36□□□□□ -2.19
CSNK1A1P48729 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CSNK1A1P48729 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CSNK1A1P48729 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CSNK1A1P48729 Y_RNA.167-201ENST00000363735 109 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 U3.9-201ENST00000363823 204 ntBASIC1.35□□□□□ -2.19
CSNK1A1P48729 RNU4-56P-201ENST00000364700 142 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms