Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNC1P48547 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
KCNC1P48547 RNU2-27P-201ENST00000516185 142 ntBASIC3.46□□□□□ -1.86
KCNC1P48547 AC023632.4-201ENST00000517783 191 ntBASIC3.46□□□□□ -1.86
KCNC1P48547 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.46□□□□□ -1.86
KCNC1P48547 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNC1P48547 U4.6-201ENST00000621618 127 ntBASIC3.46□□□□□ -1.86
KCNC1P48547 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
KCNC1P48547 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.46□□□□□ -1.86
KCNC1P48547 AL359693.1-201ENST00000614959 2407 ntBASIC3.46□□□□□ -1.86
KCNC1P48547 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KCNC1P48547 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
KCNC1P48547 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KCNC1P48547 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KCNC1P48547 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.45□□□□□ -1.86
KCNC1P48547 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNC1P48547 Y_RNA.101-201ENST00000363154 102 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 RNU6-151P-201ENST00000364158 107 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 Y_RNA.238-201ENST00000364441 102 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KCNC1P48547 U3.19-201ENST00000390893 196 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 ATP5A1P2-201ENST00000412323 255 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 AC138623.1-201ENST00000418060 216 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 RPL23AP95-201ENST00000426806 265 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNC1P48547 RN7SL594P-201ENST00000470590 287 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 AC010409.1-201ENST00000487382 476 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 RNU6-703P-201ENST00000516946 107 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 RNU6-1183P-201ENST00000517054 60 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 TGIF1P1-201ENST00000558095 802 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNC1P48547 MIR4444-1-201ENST00000581696 74 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 MIR4444-2-201ENST00000584390 74 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
KCNC1P48547 AL109809.4-201ENST00000603520 2185 ntBASIC3.45□□□□□ -1.86
KCNC1P48547 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNC1P48547 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
KCNC1P48547 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNC1P48547 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
KCNC1P48547 Y_RNA.7-201ENST00000362352 102 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 Y_RNA.218-201ENST00000364218 104 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 RNU6-898P-201ENST00000365627 104 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNC1P48547 SNORA36A-201ENST00000384221 132 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
KCNC1P48547 RNU6-1199P-201ENST00000411249 104 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNC1P48547 AL035423.1-201ENST00000420331 213 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AL445584.1-201ENST00000431451 330 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 SNRPEP9-201ENST00000436794 238 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AC124916.1-201ENST00000444020 547 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AL357552.1-201ENST00000445254 415 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AC005042.3-201ENST00000453230 174 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 snoU13.22-201ENST00000459428 104 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.44□□□□□ -1.86
KCNC1P48547 AL121772.2-201ENST00000614331 297 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 Y_RNA.778-201ENST00000620203 90 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNC1P48547 AC093010.3-201ENST00000570269 15214 ntBASIC3.44□□□□□ -1.86
KCNC1P48547 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
KCNC1P48547 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
KCNC1P48547 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
KCNC1P48547 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.43□□□□□ -1.86
KCNC1P48547 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCNC1P48547 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCNC1P48547 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCNC1P48547 Y_RNA.23-201ENST00000362496 106 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 Y_RNA.75-201ENST00000362927 97 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 RNU6-217P-201ENST00000384164 104 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 MIR449B-201ENST00000384995 97 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 AL035461.1-201ENST00000421490 332 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.43□□□□□ -1.86
KCNC1P48547 AC008267.6-201ENST00000441664 139 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 AL358232.1-201ENST00000448030 501 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 SNORD105B-201ENST00000458770 79 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 RPS27AP9-201ENST00000477681 438 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNC1P48547 SNORD59.2-201ENST00000516873 68 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.43□□□□□ -1.86
KCNC1P48547 AC020895.1-201ENST00000595362 272 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
KCNC1P48547 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KCNC1P48547 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
KCNC1P48547 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNC1P48547 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KCNC1P48547 RNU6-137P-201ENST00000363680 108 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 Y_RNA.182-201ENST00000363880 111 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 RNU1-140P-201ENST00000365040 165 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 AP002088.1-201ENST00000382740 395 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 MIR670-201ENST00000390142 98 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KCNC1P48547 RPL23AP82-202ENST00000427528 469 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 AP000705.1-201ENST00000454567 350 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 snoU13.6-201ENST00000458785 104 ntBASIC3.42□□□□□ -1.86
KCNC1P48547 RN7SKP18-201ENST00000516005 275 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms