Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC021231.3-201ENST00000558497 370 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 SNORA77B-201ENST00000578179 125 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.29□□□□□ -2.2
SLC1A1P43005 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
SLC1A1P43005 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SLC1A1P43005 RNU6-271P-201ENST00000363858 105 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 Y_RNA.399-201ENST00000383955 105 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC1A1P43005 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.28□□□□□ -2.2
SLC1A1P43005 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.28□□□□□ -2.2
SLC1A1P43005 AC099677.2-201ENST00000436385 175 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AC244505.5-201ENST00000443639 207 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC1A1P43005 SNRPFP3-201ENST00000457792 225 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AC016925.1-201ENST00000458303 298 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AC008628.2-201ENST00000502605 298 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.28□□□□□ -2.2
SLC1A1P43005 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC1A1P43005 RNU6-567P-201ENST00000516746 107 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC1A1P43005 AC090517.1-201ENST00000569307 266 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 MIR3913-1-201ENST00000577744 102 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.28□□□□□ -2.2
SLC1A1P43005 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.28□□□□□ -2.2
SLC1A1P43005 AC025449.1-201ENST00000603896 529 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AC073413.2-201ENST00000604332 360 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AL603755.1-201ENST00000619504 163 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SLC1A1P43005 AC091931.1-201ENST00000623488 728 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 SNORA43.4-201ENST00000629559 138 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
SLC1A1P43005 AL390237.1-201ENST00000404226 1415 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.27□□□□□ -2.21
SLC1A1P43005 RNU6-1026P-201ENST00000384465 108 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 MIR520A-201ENST00000384862 85 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 MIR208B-201ENST00000401172 77 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.27□□□□□ -2.21
SLC1A1P43005 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
SLC1A1P43005 HSPE1P9-201ENST00000440046 311 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 ATP5J2P3-201ENST00000451550 258 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 C1DP4-201ENST00000455429 424 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 RNU7-167P-201ENST00000459160 62 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 RN7SKP210-201ENST00000459176 261 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AC010531.2-201ENST00000465012 153 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 RPL26P26-201ENST00000480251 434 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.27□□□□□ -2.21
SLC1A1P43005 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.27□□□□□ -2.21
SLC1A1P43005 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.27□□□□□ -2.21
SLC1A1P43005 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.27□□□□□ -2.21
SLC1A1P43005 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.27□□□□□ -2.21
SLC1A1P43005 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.27□□□□□ -2.21
SLC1A1P43005 MTATP6P24-201ENST00000576835 677 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 MIR5583-1-201ENST00000580941 59 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AC023043.2-201ENST00000589678 1026 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AC069114.2-201ENST00000604699 304 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 RNU6-85P-201ENST00000605989 107 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AC009994.1-201ENST00000606889 253 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AC008536.2-201ENST00000607284 349 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 AP001596.2-201ENST00000608410 312 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 MIR8063-201ENST00000621930 81 ntBASIC1.27□□□□□ -2.21
SLC1A1P43005 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SLC1A1P43005 RNU6-862P-201ENST00000362804 105 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 SNORA17.3-201ENST00000391159 129 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 CETN4P-201ENST00000432407 469 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 JTBP1-201ENST00000441314 247 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 snoU13.30-201ENST00000458951 104 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.26□□□□□ -2.21
SLC1A1P43005 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.26□□□□□ -2.21
SLC1A1P43005 AL163973.1-201ENST00000484753 577 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 RPL36AP21-201ENST00000490372 323 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.26□□□□□ -2.21
SLC1A1P43005 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC1A1P43005 AC105417.1-201ENST00000514691 285 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 RNA5SP445-201ENST00000515889 115 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 SNORD60.2-201ENST00000516883 86 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 RNA5SP437-201ENST00000517249 129 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 AL137161.1-201ENST00000532231 390 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC1A1P43005 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC1A1P43005 SUB1P3-201ENST00000564581 315 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 SNORA59B-202ENST00000578183 701 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 MIR3941-201ENST00000582572 103 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 Z94722.1-201ENST00000604328 474 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 U2.17-201ENST00000611454 95 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.26□□□□□ -2.21
SLC1A1P43005 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SLC1A1P43005 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SLC1A1P43005 AC100821.1-201ENST00000523153 2479 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 RNU6-903P-201ENST00000391270 109 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 RNU2-7P-201ENST00000410794 178 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 AP000275.1-201ENST00000411943 390 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.25□□□□□ -2.21
SLC1A1P43005 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.25□□□□□ -2.21
SLC1A1P43005 EBAG9P1-201ENST00000418955 543 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 AC108667.1-201ENST00000428618 249 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 C8orf59P1-201ENST00000429930 303 ntBASIC1.25□□□□□ -2.21
SLC1A1P43005 MTCO2P11-201ENST00000431069 680 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms