Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-827P-201ENST00000365553 106 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RNU6-378P-201ENST00000384324 107 ntBASIC1.21□□□□□ -2.22
RFC3P40938 MIR520A-201ENST00000384862 85 ntBASIC1.21□□□□□ -2.22
RFC3P40938 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RFC3P40938 MTCO1P21-201ENST00000416634 589 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.21□□□□□ -2.22
RFC3P40938 FTH1P12-201ENST00000432137 551 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AC099677.2-201ENST00000436385 175 ntBASIC1.21□□□□□ -2.22
RFC3P40938 HSPE1P9-201ENST00000440046 311 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RNU7-14P-201ENST00000459331 62 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RPS26P55-201ENST00000471178 356 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.21□□□□□ -2.22
RFC3P40938 AK3P2-201ENST00000507976 429 ntBASIC1.21□□□□□ -2.22
RFC3P40938 MTCO3P28-201ENST00000513351 515 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RNU6-415P-201ENST00000516252 97 ntBASIC1.21□□□□□ -2.22
RFC3P40938 SNORA18.6-201ENST00000516792 115 ntBASIC1.21□□□□□ -2.22
RFC3P40938 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
RFC3P40938 AC103996.1-201ENST00000555468 102 ntBASIC1.21□□□□□ -2.22
RFC3P40938 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.21□□□□□ -2.22
RFC3P40938 AC021231.3-201ENST00000558497 370 ntBASIC1.21□□□□□ -2.22
RFC3P40938 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.21□□□□□ -2.22
RFC3P40938 CYP4A27P-201ENST00000567218 190 ntBASIC1.21□□□□□ -2.22
RFC3P40938 Z98751.3-201ENST00000604447 521 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AC069114.2-201ENST00000604699 304 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AP001485.1-201ENST00000604799 199 ntBASIC1.21□□□□□ -2.22
RFC3P40938 AC005520.5-201ENST00000613926 164 ntBASIC1.21□□□□□ -2.22
RFC3P40938 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
RFC3P40938 AL159152.1-201ENST00000635019 2587 ntBASIC1.2□□□□□ -2.22
RFC3P40938 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RFC3P40938 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
RFC3P40938 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
RFC3P40938 Y_RNA.399-201ENST00000383955 105 ntBASIC1.2□□□□□ -2.22
RFC3P40938 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
RFC3P40938 RNU6-606P-201ENST00000384721 111 ntBASIC1.2□□□□□ -2.22
RFC3P40938 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.2□□□□□ -2.22
RFC3P40938 MIR1287-201ENST00000408492 90 ntBASIC1.2□□□□□ -2.22
RFC3P40938 RNU6-248P-201ENST00000410720 107 ntBASIC1.2□□□□□ -2.22
RFC3P40938 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.2□□□□□ -2.22
RFC3P40938 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.2□□□□□ -2.22
RFC3P40938 EBAG9P1-201ENST00000418955 543 ntBASIC1.2□□□□□ -2.22
RFC3P40938 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.2□□□□□ -2.22
RFC3P40938 AL365203.2-201ENST00000423444 196 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AC133104.1-201ENST00000429100 218 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AC007395.1-201ENST00000451333 677 ntBASIC1.2□□□□□ -2.22
RFC3P40938 SCARNA18-201ENST00000459004 134 ntBASIC1.2□□□□□ -2.22
RFC3P40938 RPL9P9-202ENST00000466501 579 ntBASIC1.2□□□□□ -2.22
RFC3P40938 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
RFC3P40938 RPL36AP21-201ENST00000490372 323 ntBASIC1.2□□□□□ -2.22
RFC3P40938 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AC008628.2-201ENST00000502605 298 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.2□□□□□ -2.22
RFC3P40938 RNU5F-4P-201ENST00000516581 114 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.2□□□□□ -2.22
RFC3P40938 HMGB1P33-201ENST00000563485 527 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AGGF1P4-201ENST00000568249 801 ntBASIC1.2□□□□□ -2.22
RFC3P40938 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.2□□□□□ -2.22
RFC3P40938 AP001836.1-201ENST00000604675 523 ntBASIC1.2□□□□□ -2.22
RFC3P40938 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AC136475.10-201ENST00000620253 385 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AC009161.2-201ENST00000624626 138 ntBASIC1.2□□□□□ -2.22
RFC3P40938 AC010615.1-201ENST00000594254 1764 ntBASIC1.19□□□□□ -2.22
RFC3P40938 FGF7P2-201ENST00000332473 296 ntBASIC1.19□□□□□ -2.22
RFC3P40938 Y_RNA.255-201ENST00000364581 97 ntBASIC1.19□□□□□ -2.22
RFC3P40938 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
RFC3P40938 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
RFC3P40938 SNORA25.9-201ENST00000365087 128 ntBASIC1.19□□□□□ -2.22
RFC3P40938 RNU6-282P-201ENST00000365357 103 ntBASIC1.19□□□□□ -2.22
RFC3P40938 RNU6-456P-201ENST00000384493 107 ntBASIC1.19□□□□□ -2.22
RFC3P40938 RNU2-29P-201ENST00000410423 189 ntBASIC1.19□□□□□ -2.22
RFC3P40938 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.19□□□□□ -2.22
RFC3P40938 RPS6P15-201ENST00000431996 751 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC245047.4-201ENST00000433189 144 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
RFC3P40938 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.19□□□□□ -2.22
RFC3P40938 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.19□□□□□ -2.22
RFC3P40938 ATP5J2P3-201ENST00000451550 258 ntBASIC1.19□□□□□ -2.22
RFC3P40938 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.19□□□□□ -2.22
RFC3P40938 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.19□□□□□ -2.22
RFC3P40938 AC079140.3-201ENST00000511111 550 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC091874.1-201ENST00000511402 339 ntBASIC1.19□□□□□ -2.22
RFC3P40938 RNA5SP437-201ENST00000517249 129 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC069113.1-201ENST00000517763 267 ntBASIC1.19□□□□□ -2.22
RFC3P40938 MIR3915-201ENST00000578518 97 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.19□□□□□ -2.22
RFC3P40938 AC009994.1-201ENST00000606889 253 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC064807.4-201ENST00000607201 407 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AP001596.2-201ENST00000608410 312 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AC083806.3-201ENST00000614016 455 ntBASIC1.19□□□□□ -2.22
RFC3P40938 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.19□□□□□ -2.22
RFC3P40938 AL136221.1-201ENST00000621449 509 ntBASIC1.19□□□□□ -2.22
RFC3P40938 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
RFC3P40938 ICE2P2-201ENST00000483823 2787 ntBASIC1.19□□□□□ -2.22
RFC3P40938 RNU6-1019P-201ENST00000364424 107 ntBASIC1.18□□□□□ -2.22
RFC3P40938 RNU4-91P-201ENST00000364778 135 ntBASIC1.18□□□□□ -2.22
RFC3P40938 Y_RNA.504-201ENST00000384481 104 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AP000275.1-201ENST00000411943 390 ntBASIC1.18□□□□□ -2.22
RFC3P40938 PIGFP2-201ENST00000421400 651 ntBASIC1.18□□□□□ -2.22
RFC3P40938 MTCO2P34-201ENST00000421994 607 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms